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Showing 20 out of 28,732 Resources on page 137

SynergyFinder web application

Stand-alone web-application for interactive analysis and visualization of multi-drug (2 or more drugs) multi-dose combination response data., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.

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  • RRID
  • 1 year ago - submitted by Hyungu Kang

McGill University Goodman Cancer Institute Histology Innovation Platform Core Facility

Core provides expertise, cutting edge technology, and efficient workflows in histological processing, analysis and interpretation.

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  • SciCrunch
  • 1 year ago - submitted by Edyta Vieth

MATLAB Programs for Flow Cytometry

Software package contains suite of functions that enables analysis of flow cytometry data.

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  • RRID
  • 1 year ago - by Anonymous

Western Blot Quantification Toolkit in MATLAB

Software package to quantify intensity of bands on western blot.

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  • RRID
  • 1 year ago - by Anonymous

VirtualDub

Open-source software for video capture and video processing for Microsoft Windows. Designed to process linear video streams, including filtering and recompression. It uses AVI container format to store captured video. Video capture/processing utility for 32-bit and 64-bit Windows platforms. Used for processing AVI files, although it can read (not write) MPEG-1 and also handle sets of BMP images.

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  • RRID
  • 1 year ago - by Anonymous

PeptideMiner

Software pipeline that uses profile hidden Markov models of neuropeptide families to search query datasets for neuropeptide homologues.

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  • RRID
  • 1 year ago - by Anonymous

statista

Platform for data and statistics. Website provides data-driven services, collection of statistics, reports, and insights on over 80,000 topics.

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  • RRID
  • 1 year ago - by Anonymous

HVSeeker

Software tool for distinguishing between bacterial and phage sequences. Consists of two separate models: one analyzing DNA sequences and the other focusing on proteins.

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  • RRID
  • 1 year ago - submitted by Sven Hauns

DeepMEI

Software tool to detect mobile element insertion in human short read sequencing data.

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  • RRID
  • 1 year ago - by Anonymous

cooltools

Software suite of computational tools that enables flexible, scalable, and reproducible analysis of high-resolution contact frequency data. Provides suite of computational tools with paired python API and command line access, which facilitates workflows either on high-performance computing clusters or via custom analysis notebooks. As part of the Open2C ecosystem, cooltools also provides detailed introductions to key concepts in Hi-C-data analysis with interactive notebook documentation.

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  • RRID
  • 1 year ago - by Anonymous

data.table

Software R data.table package extends data.frame. Provides high-performance version of base R's data.frame with syntax and feature enhancements for ease of use, convenience and programming speed.

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  • RRID
  • 1 year ago - by Anonymous

dendextend

Software package extending R core dendrogram functions.

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  • RRID
  • 1 year ago - by Anonymous

dendroextras

Software R package providing additional functions to cut, label and colour dendrogram clusters.

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  • RRID
  • 1 year ago - by Anonymous

GGally

Software R package that extends ggplot2 by adding several functions to reduce complexity of combining geoms with transformed data. Some of these functions include pairwise plot matrix, scatterplot plot matrix, parallel coordinates plot, survival plot, and several functions to plot networks.

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  • RRID
  • 1 year ago - by Anonymous

PRROC

Software package for computing and visualizing precision-recall and receiver operating characteristic curves in R for weighted and unweighted data.

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  • RRID
  • 1 year ago - by Anonymous

UpSetR

Software R package for visualization of intersecting sets and their properties.

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  • RRID
  • 1 year ago - by Anonymous

distiller-nf

Software modular Hi-C mapping pipeline for reproducible data analysis. Nextflow-based modular Hi-C mapping pipeline.

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  • RRID
  • 1 year ago - by Anonymous

Mustache

Software tool for multi-scale detection of chromatin loops from Hi-C and Micro-C contact maps in high resolutions (10kbp all the way to 500bp and even more). Used to detect chromatin loops caused by interaction of DNA segments with variable size.

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  • RRID
  • 1 year ago - by Anonymous

Integrated Proteome Resources

Integrated proteome resources center in China to accelerate data sharing in proteomics. Composed of data submission system and proteome database. Submission system is established under the guidance of data-sharing policy made by ProteomeXchange consortium. Registered users can submit their proteomic datasets to iProX in public or private modes. Once associated manuscript has been published, dataset becomes automatically public.

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  • RRID
  • 1 year ago - by Anonymous

AutoPVS

Software automatic classification tool for PVS1 interpretation of null variants.

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  • RRID
  • 1 year ago - by Anonymous