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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Porifera Ontology
 
Resource Report
Resource Website
1+ mentions
Porifera Ontology (RRID:SCR_000134) PORO ontology, data or information resource, controlled vocabulary An ontology covering the anatomy of Porifera (sponges). owl, anatomy is listed by: BioPortal
is listed by: OBO
is listed by: Google Code
is listed by: Ontobee
is related to: Information Artifact Ontology
Free, Available for download, Freely available nlx_157558 https://code.google.com/p/porifera-ontology/, http://purl.bioontology.org/ontology/PORO, http://purl.obolibrary.org/obo/poro.owl http://purl.obolibrary.org/obo/poro SCR_000134 2026-08-08 11:57:12 1
NCBO Annotator
 
Resource Report
Resource Website
1+ mentions
NCBO Annotator (RRID:SCR_005329) NCBO Annotator web service, production service resource, software resource, data access protocol, service resource A Web service that annotates textual metadata (e.g. journal abstract) with relevant ontology concepts. NCBO uses this Web service to annotate resources in the NCBO Resource Index. They also provide this Web service as a stand-alone service for users. This Web service can be accessed through BioPortal or used directly in your software. Currently, the annotation workflow is based on syntactic concept recognition (using concept names and synonyms) and on a set of semantic expansion algorithms that leverage the semantics in ontologies (e.g., is_a relations). Their service methodology leverages ontologies to create annotations of raw text and returns them using semantic web standards. ontology, annotation, bio.tools is listed by: OMICtools
is listed by: Debian
is listed by: bio.tools
is related to: STOP
has parent organization: BioPortal
has parent organization: National Centers for Biomedical Computing
has parent organization: Stanford University; Stanford; California
NHGRI U54 HG004028 PMID:19483092 biotools:bioportal, nlx_144389, OMICS_01172 https://bio.tools/bioportal SCR_005329 Open Biomedical Annotator, NCBO BioPortal Annotator 2026-08-08 11:58:26 6
Computer Assisted Brain Injury Rehabilitation Ontology
 
Resource Report
Resource Website
Computer Assisted Brain Injury Rehabilitation Ontology (RRID:SCR_005288) CABRO ontology, data or information resource, controlled vocabulary A web ontology for the semantic representation of the computer assisted brain trauma rehabilitation domain. This is a novel and emerging domain, since it employs the use of robotic devices, adaptation software and machine learning to facilitate interactive, adaptive and personalized rehabilitation care, patient monitoring and assisted living. owl is listed by: BioPortal Brain trauma nlx_157373 SCR_005288 2026-08-08 11:58:37 0
Stanford Center for Biomedical Informatics Research
 
Resource Report
Resource Website
Stanford Center for Biomedical Informatics Research (RRID:SCR_005698) BMIR data or information resource, portal, organization portal, laboratory portal Mark Musen''s laboratory studies components for building knowledge-based systems, controlled terminologies and ontologies, and technology for the Semantic Web. For more than two decades, Musen''s group has worked to elucidate reusable building blocks of intelligent systems, and to develop scalable computational architectures for systems with significant applications in biomedicine. Informatics is the study of information: its structure, its communication, and its use. As society becomes increasingly information intensive, the need to understand, create, and apply new methods for modeling, managing, and acquiring information has never been greater especially in biomedicine. BMIR is home to world class scientists and trainees developing cutting-edge ways to acquire, represent, process, and manage knowledge and data related to health, health care, and the biomedical sciences. Our faculty, students, and staff are committed to ensuring the biomedical community is properly equipped for the information age, and believe our efforts will provide the structure for the burgeoning revolution of health care and the biomedical sciences. biomedicine, informatics has parent organization: Stanford University; Stanford; California
is parent organization of: CLENCH
is parent organization of: BioPortal
is parent organization of: Center for Expanded Data Annotation and Retrieval
is parent organization of: Protege
is parent organization of: WebProtege
nlx_149147 SCR_005698 Stanford Medical Informatics 2026-08-08 11:58:45 0
Cell Line Ontology
 
Resource Report
Resource Website
1+ mentions
Cell Line Ontology (RRID:SCR_005840) CLO ontology, data or information resource, controlled vocabulary A community-driven ontology that is developed to standardize and integrate cell line information and support computer-assisted reasoning. Its focus is on permanent cell lines from culture collections. Upper ontology structures that frame the skeleton of CLO include Basic Formal Ontology and Relation Ontology. Cell lines contained in CLO are associated with terms from other ontologies such as Cell Type Ontology, NCBI Taxonomy, and Ontology for Biomedical Investigation. A common design pattern for the cell line is used to model cell lines and their attributes, the Jurkat cell line provides ane xample. Currently CLO contains over 36,000 cell line entries obtained from ATCC, HyperCLDB, Coriell, and bymanual curation. The cell lines are derived from 194 cell types, 656 anatomical entries, and 217 organisms. The OWL-based CLO is machine-readable and can be used in various applications. The CLO development has become a community effort with international collaborations. The development consortium includes experts from all over the world: the USA, Europe, and Japan. cell line, owl, ontology, standardization, information integration is listed by: BioPortal
is listed by: OBO
is related to: Cell Line Knowledge Base
has parent organization: University of Michigan Medical School; Michigan; USA
The community can contribute to this resource nlx_149363 http://bioportal.bioontology.org/ontologies/1245, http://purl.obolibrary.org/obo/clo.owl SCR_005840 2026-08-08 11:58:38 2
Read Codes Clinical Terms Version 3
 
Resource Report
Resource Website
1+ mentions
Read Codes Clinical Terms Version 3 (RRID:SCR_006055) RCD ontology, data or information resource, controlled vocabulary Ontology of clinical terms Version 3 (CTV3) (Read Codes) (Q199): National Health Service National Coding and Classification Centre umls is listed by: BioPortal nlx_157570 SCR_006055 Read Codes CTV3, Read Codes Clinical Terms Version 3 (CTV3) 2026-08-08 11:58:53 1
Randomized Controlled Trials Ontology
 
Resource Report
Resource Website
Randomized Controlled Trials Ontology (RRID:SCR_005992) RCTONT ontology, data or information resource, controlled vocabulary Ontology specifically for Randomized Controlled Trials in order to facilitate the production of systematic reviews and metaanalysis. owl is listed by: BioPortal nlx_157568 SCR_005992 2026-08-08 11:58:39 0
Regulation of Transcription Ontology
 
Resource Report
Resource Website
Regulation of Transcription Ontology (RRID:SCR_006238) RETO ontology, data or information resource, controlled vocabulary An application ontology for the domain of gene transcription regulation. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, KEGG and orthology relations. obo is listed by: BioPortal nlx_157573 SCR_006238 2026-08-08 11:58:42 0
Ontology for Biomedical Investigations
 
Resource Report
Resource Website
10+ mentions
Ontology for Biomedical Investigations (RRID:SCR_006266) OBI ontology, data or information resource, controlled vocabulary An ontology for the description of biological and clinical investigations built with international, collaborative effort. The ontology represents the design of an investigation, the protocols and instrumentation used, the material used, the data generated and the type analysis performed on it. This includes a set of universal terms that are applicable across various biological and technological domains, and domain-specific terms relevant only to a given domain. Currently OBI is being built under the Basic Formal Ontology (BFO). This project was formerly titled the Functional Genomics Investigation Ontology (FuGO) project. life-science, clinical, investigation, biomedical, protocol, instrumentation, experiment, biology, owl, molecular, cellular, organismal, multi-organismal is used by: Information Artifact Ontology
is used by: Beta Cell Genomics Ontology
is listed by: FORCE11
is listed by: BioPortal
is listed by: OBO
is related to: Information Artifact Ontology
is related to: Chemical Methods Ontology
is related to: Genomic Standards Consortium
PMID:20626927 Creative Commons Attribution License v3 nif-0000-06698 http://purl.obofoundry.org/obo/obi.owl, http://purl.obofoundry.org/obo/obi, https://www.force11.org/node/4700 SCR_006266 OBI Ontology 2026-08-08 11:58:57 21
SysMO JERM Ontology of Systems Biology for Micro-Organisms
 
Resource Report
Resource Website
SysMO JERM Ontology of Systems Biology for Micro-Organisms (RRID:SCR_004569) JERM ontology, data or information resource, controlled vocabulary An ontology to describe the entities and relationships in the SEEK database, a Systems Biology environment for the sharing and exchange of data and models. The SysMO-SEEK database contains the work of the SysMO consortium (Systems Biology of Micro-Organisms) https://seek.sysmo-db.org/ owl is listed by: BioPortal
has parent organization: SysMO-DB
nlx_157602 SCR_004569 2026-08-08 11:58:19 0
PR
 
Resource Report
Resource Website
PR (RRID:SCR_004964) PR ontology, data or information resource, controlled vocabulary An ontological representation of protein-related entities by explicitly defining them and showing the relationships between them. Each PRO term represents a distinct class of entities (including specific modified forms, orthologous isoforms, and protein complexes) ranging from the taxon-neutral to the taxon-specific. The ontology has a meta-structure encompassing three areas: proteins based on evolutionary relatedness (ProEvo); protein forms produced from a given gene locus (ProForm); and protein-containing complexes (ProComp). NOTICE: The PRO ID format has changed from PRO: to PR: (e.g. PRO:000000563 is now PR:000000563). database, obo, protein is listed by: BioPortal
has parent organization: Protein Information Resource
has parent organization: Georgetown University; Washington D.C.; USA
NIH ;
NIGMS GM080646-01
nlx_92849 SCR_004964 PRO, Protein Ontology 2026-08-08 11:58:23 0
Cereal Plant Development Ontology
 
Resource Report
Resource Website
Cereal Plant Development Ontology (RRID:SCR_005095) GRO-CPD ontology, data or information resource, controlled vocabulary A structured controlled vocabulary for describing cereal plant development and growth stages. Please note that this ontology has now been superseded by the Plant Ontology. obo is listed by: BioPortal
is related to: Plant Ontology
has parent organization: Gramene
nlx_157358 http://www.gramene.org/plant_ontology/ SCR_005095 2026-08-08 11:58:31 0
Bleeding History Phenotype Ontology
 
Resource Report
Resource Website
Bleeding History Phenotype Ontology (RRID:SCR_001165) BHO ontology, data or information resource, controlled vocabulary An application ontology devoted to the standardized recording of phenotypic data related to hemorrhagic disorders. owl is listed by: BioPortal Hemorrhagic disorder nlx_157338 SCR_001165 2026-08-08 11:57:26 0
Body System Terms from ICD11
 
Resource Report
Resource Website
Body System Terms from ICD11 (RRID:SCR_001252) ICD11-BODYSYSTEM ontology, data or information resource, controlled vocabulary Ontology of a set of body-system terms used in the ICD (International Classification of Diseases) 11 revision owl is listed by: BioPortal THIS RESOURCE IS NO LONGER IN SERVICE nlx_157339 SCR_001252 2026-08-08 11:57:24 0
Teleost Anatomy Ontology
 
Resource Report
Resource Website
1+ mentions
Teleost Anatomy Ontology (RRID:SCR_001610) TAO ontology, data or information resource, controlled vocabulary A multi-species anatomy ontology for teleost fishes. It was originally seeded from ZFA, but covers terms relevant to other taxa. The TAO uses terms from the Common Anatomy Reference Ontology (CARO) as a template for its upper level nodes, and the Vertebrate Skeletal Anatomy Ontology (VSAO) for general skeletal anatomy classes. Growth of the TAO is enabled by contributions from data curators and the ichthyological community. The TAO can be browsed by using the NCBO BioPortal and data annotated using TAO terms can be queried using the Phenoscape Knowedgebase. homology, anatomy, morphology, fish, obo, organismal, zebrafish anatomy uses: Zebrafish Anatomical Ontology
uses: Common Anatomy Reference Ontology
uses: Vertebrate Skeletal Anatomy Ontology
is used by: Phenoscape Knowledgebase
is listed by: BioPortal
is listed by: OBO
has parent organization: Phenoscape
PMID:20547776 Free, Freely available nlx_153876 http://purl.obolibrary.org/obo/tao.obo, http://bioportal.bioontology.org/ontologies/38362?p=terms https://www.nescent.org/phenoscape/ SCR_001610 2026-08-08 11:57:42 1
Biological Pathways Exchange
 
Resource Report
Resource Website
50+ mentions
Biological Pathways Exchange (RRID:SCR_001681) ontology, data or information resource, controlled vocabulary, project portal, portal Community standard for pathway data sharing. Standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data. Supports data exchange between pathway data groups and thus reduces complexity of interchange between data formats by providing accepted standard format for pathway data. Open and collaborative effort by community of researchers, software developers, and institutions. BioPAX is defined in OWL DL and is represented in RDF/XML format.Uses W3C standard Web Ontology Language, OWL. Standard language, community standard, pathway data sharing, biological pathway data, data exchange, W3C standard, Web Ontology Language, OWL, is listed by: BioPortal
is related to: cPath
is related to: Biofactoid
is related to: PathGuide: the pathway resource list
U.S. Department of Energy Workshop ;
NHGRI P41HG004118
PMID:20829833 Free, Available for download, Freely available SCR_009881, nlx_157327, nif-0000-10171 http://purl.bioontology.org/ontology/BP SCR_001681 BioPAX, BioPAX: Biological Pathways Exchange 2026-08-08 11:57:32 90
Bioassay Ontology
 
Resource Report
Resource Website
1+ mentions
Bioassay Ontology (RRID:SCR_002638) BAO ontology, data or information resource, controlled vocabulary Ontology to describe and categorize chemical biology and drug screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis. BAO is an extensible, knowledge-based, highly expressive (currently SHOIQ(D)) description of biological assays making use of descriptive logic based features of the Web Ontology Language (OWL). BAO currently has over 700 classes and also makes use of several other ontologies. It describes several concepts related to biological screening, including Perturbagen, Format, Meta Target, Design, Detection Technology, and Endpoint. Perturbagens are perturbing agents that are screened in an assay; they are mostly small molecules. Assay Meta Target describes what is known about the biological system and / or its components interrogated in the assay (and influenced by the Perturbagen). Meta target can be directly described as a molecular entity (e.g. a purified protein or a protein complex), or indirectly by a biological process or event (e.g. phosphorylation). Format describes the biological or chemical features common to each test condition in the assay and includes biochemical, cell-based, organism-based, and variations thereof. The assay Design describes the assay methodology and implementation of how the perturbation of the biological system is translated into a detectable signal. Detection Technology relates to the physical method and technical details to detect and record a signal. Endpoints are the final HTS results as they are usually published (such as IC50, percent inhibition, etc). BAO has been designed to accommodate multiplexed assays. All main BAO components include multiple levels of sub-categories and specification classes, which are linked via object property relationships forming an expressive knowledge-based representation. chemical biology, drug screening, assay, perturbation, high-throughput screening, owl is used by: LINCS Information Framework
is listed by: BioPortal
is parent organization of: G Protein-Coupled Receptor BioAssays Ontology
Free, Freely available nlx_156065 SCR_002638 2026-08-08 11:57:44 7
Gene Ontology
 
Resource Report
Resource Website
10000+ mentions
Gene Ontology (RRID:SCR_002811) GO data or information resource, knowledge environment resource, consortium, project portal, portal, organization portal Computable knowledge regarding functions of genes and gene products. GO resources include biomedical ontologies that cover molecular domains of all life forms as well as extensive compilations of gene product annotations to these ontologies that provide largely species-neutral, comprehensive statements about what gene products do. Used to standardize representation of gene and gene product attributes across species and databases. gene, product, annotation, molecular, function, cellular, biological, role, database, query, obo, gold standard, bio.tools, FASEB list is used by: NIF Data Federation
is used by: GreenPhylDB
is used by: LIPID MAPS Proteome Database
is used by: Aging Portal
is used by: ChannelPedia
is used by: Open PHACTS
is used by: CoPub
is used by: PhenoGO
is used by: Database for Annotation Visualization and Integrated Discovery
is used by: MitoMiner
is used by: dcGO
is used by: Pathway Analysis Tool for Integration and Knowledge Acquisition
is used by: barleyGO
is used by: SynGO
is used by: Functional Annotation
is used by: SwissLipids
is listed by: BioPortal
is listed by: OBO
is listed by: OMICtools
is listed by: bio.tools
is listed by: Debian
is affiliated with: Mouse Genome Informatics: The Gene Ontology Project
is related to: GenNav
is related to: SynaptomeDB
is related to: High-Throughput GoMiner
is related to: Onto-Design
is related to: OnEx - Ontology Evolution Explorer
is related to: Avadis
is related to: GONUTS
is related to: PiNGO
is related to: Automated Microarray Pipeline
is related to: categoryCompare
is related to: globaltest
is related to: Semantic Measures Library
is related to: WegoLoc
is related to: AnimalTFDB
is related to: MEME Suite - Motif-based sequence analysis tools
is related to: Arabidopsis Hormone Database
is related to: DAVID
is related to: Arabidopsis thaliana Protein Interactome Database
is related to: TM4 Microarray Software Suite - TIGR MultiExperiment Viewer
is related to: pSTIING
is related to: GoMiner
is related to: FunSimMat
is related to: GeneSpeed- A Database of Unigene Domain Organization
is related to: Centre for Modeling Human Disease Gene Trap Resource
is related to: Patterns of Gene Expression in Drosophila Embryogenesis
is related to: Babelomics
is related to: BioPerl
is related to: GeneCruiser
is related to: GOLEM An interactive, graphical gene-ontology visualization, navigation, and analysis tool
is related to: GOToolBox Functional Investigation of Gene Datasets
is related to: Cotton EST Database
is related to: MouseNET
is related to: PLANTTFDB
is related to: T-profiler
is related to: Physico-Chemical Process
is related to: Integrated Molecular Interaction Database
is related to: SEGS
is related to: GOCat
is related to: Quantitative Enrichment of Sequence Tags
is related to: Neural-Immune Gene Ontology
is related to: INMEX
is related to: StRAnGER
is related to: QuickGO
is related to: Repository of molecular brain neoplasia data
is related to: Cardiovascular Gene Ontology Annotation Initiative
is related to: PANTHER
is related to: Short Time-series Expression Miner (STEM)
is related to: DATFAP
is related to: GORetriever
is related to: Gene Ontology Browsing Utility (GOBU)
is related to: GeneTools
is related to: GOSlimViewer
is related to: go-moose
is related to: Network Ontology Analysis
is related to: Onto-Compare
is related to: Onto-Express
is related to: OntoVisT
is related to: STRAP
is related to: CGAP GO Browser
is related to: COBrA
is related to: Gene Class Expression
is related to: GeneInfoViz
is related to: GOfetcher
is related to: GoFish
is related to: GOProfiler
is related to: GOanna
is related to: Manatee
is related to: Pandora - Protein ANnotation Diagram ORiented Analysis
is related to: TAIR Keyword Browser
is related to: Wandora
is related to: GOTaxExplorer
is related to: Onto-Miner
is related to: Onto-Translate
is related to: ToppGene Suite
is related to: DBD - Slim Gene Ontology
is related to: ONTO-PERL
is related to: Blip: Biomedical Logic Programming
is related to: OWL API
is related to: CLENCH
is related to: BiNGO: A Biological Networks Gene Ontology tool
is related to: CateGOrizer
is related to: FuSSiMeG: Functional Semantic Similarity Measure between Gene-Products
is related to: ProteInOn
is related to: GeneMerge
is related to: GraphWeb
is related to: ClueGO
is related to: CLASSIFI - Cluster Assignment for Biological Inference
is related to: GOHyperGAll
is related to: FuncAssociate: The Gene Set Functionator
is related to: GOdist
is related to: FuncExpression
is related to: FunCluster
is related to: FIVA - Functional Information Viewer and Analyzer
is related to: GARBAN
is related to: GOEx - Gene Ontology Explorer
is related to: SGD Gene Ontology Slim Mapper
is related to: GOArray
is related to: SNPsandGO
is related to: GoSurfer
is related to: GOtcha
is related to: MAPPFinder
is related to: GoAnnotator
is related to: MetaGeneProfiler
is related to: OntoGate
is related to: ProfCom - Profiling of complex functionality
is related to: SerbGO
is related to: SOURCE
is related to: Ontologizer
is related to: THEA - Tools for High-throughput Experiments Analysis
is related to: Generic GO Term Mapper
is related to: GREAT: Genomic Regions Enrichment of Annotations Tool
is related to: GoBean - a Java application for Gene Ontology enrichment analysis
is related to: TXTGate
is related to: GO-Module
is related to: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures
is related to: G-SESAME - Gene Semantic Similarity Analysis and Measurement Tools
is related to: MalaCards
is related to: FSST - Functional Similarity Search Tool
is related to: Expression Profiler
is related to: GOChase
is related to: GoPubMed
is related to: Whatizit
is related to: REViGO
is related to: WEGO - Web Gene Ontology Annotation Plot
is related to: Blast2GO
is related to: InterProScan
is related to: PubSearch
is related to: TrED
is related to: CharProtDB: Characterized Protein Database
is related to: VirHostNet: Virus-Host Network
is related to: Pathbase
is related to: GO Online SQL Environment (GOOSE)
is related to: Neurobehavior Ontology
is related to: InterSpecies Analysing Application using Containers
is related to: KOBAS
is related to: ConceptWiki
is related to: GeneTerm Linker
is related to: Bioconductor
is related to: ErmineJ
is related to: Gene Ontology For Functional Analysis (GOFFA)
is related to: MGI GO Browser
is related to: Comparative Toxicogenomics Database (CTD)
is related to: GOEAST - Gene Ontology Enrichment Analysis Software Toolkit
is related to: Ontology Lookup Service
is related to: LexGrid
is related to: WebGestalt: WEB-based GEne SeT AnaLysis Toolkit
is related to: g:Profiler
is related to: OwlSim
is related to: GOrilla: Gene Ontology Enrichment Analysis and Visualization Tool
is related to: YeTFaSCo
is related to: FastSemSim
is related to: RamiGO
is related to: AutismKB
is related to: GeneCodis
is related to: FunSpec
is related to: FunNet - Transcriptional Networks Analysis
is related to: PhenoM - Phenomics of yeast Mutants
is related to: agriGO
is related to: GOblet
is related to: DynGO
is related to: SeqExpress
is related to: ProbeExplorer
is related to: ECgene: Gene Modeling with Alternative Splicing
is related to: Organelle DB
is related to: Gemma
is related to: Candidate Genes to Inherited Diseases
is related to: Proteome Analyst PA-GOSUB
is related to: Network Analysis, Visualization and Graphing TORonto
is related to: GOstat
is related to: Onto-Express To Go (OE2GO)
is related to: Tk-GO
is related to: EGAN: Exploratory Gene Association Networks
is related to: Spotfire
is related to: GOMO - Gene Ontology for Motifs
is related to: GFINDer: Genome Function INtegrated Discoverer
is related to: Generic GO Term Finder
is related to: Agile Protein Interactomes DataServer
is related to: AgingDB
is related to: UBERON
is related to: Algal Functional Annotation Tool
is related to: gsGator
is related to: Flash Gviewer
is related to: Cerebellar Development Transcriptome Database
is related to: PlantNATsDB - Plant Natural Antisense Transcripts DataBase
is related to: EASE: the Expression Analysis Systematic Explorer
is related to: PiGenome
is related to: L2L Microarray Analysis Tool
is related to: MeGO
is related to: CELDA Ontology
is related to: Diabetes Disease Portal
is related to: MatrixDB
is related to: Kidney and Urinary Pathway Knowledge Base
is related to: MouseCyc
is related to: Candida Genome Database
is related to: Honey Bee Brain EST Project
is related to: ECO
is related to: FlyMine
is related to: Gramene
is related to: 3D-Interologs
is related to: Biomine
is related to: UniProtKB
is related to: NCBI BioSystems Database
is related to: EBIMed
is related to: Coremine Medical
is related to: EMAGE Gene Expression Database
is related to: GeneMANIA
is related to: Yeast Search for Transcriptional Regulators And Consensus Tracking
is related to: GeneTrail
is related to: Magic
is related to: Mouse Genome Informatics (MGI)
is related to: FlyBase
is related to: InterPro
is related to: InnateDB
is related to: canSAR
is related to: HPRD - Human Protein Reference Database
is related to: CRCView
is related to: Integrated Manually Extracted Annotation
is related to: LegumeIP
is related to: Renal Disease Portal
is related to: PhenoGO
is related to: DOAF
is related to: OBO
is related to: biomaRt
is related to: OncoboxPD
is parent organization of: AmiGO
is parent organization of: GOlr
is parent organization of: RefGenome
is parent organization of: OBO-Edit
is parent organization of: OWLTools
is parent organization of: Gene Ontology Tools
is parent organization of: Gene Ontology Extension
is parent organization of: SO
is parent organization of: go-db-perl
is parent organization of: go-perl
works with: topGO
works with: DIANA-mirPath
works with: GOnet
is organization facet of: Alliance of Genome Resources
European Union QLRI-CT-2001-0098;
European Union QLRI-CT-2001-00015;
NHGRI P41 HG002273
PMID:23161678
PMID:10802651
Free, Freely available, Available for download biotools:go, OMICS_02278, nif-0000-02915 http://bioportal.bioontology.org/ontologies/GO, https://bio.tools/go SCR_002811 the Gene Ontology, GO, Gene Ontology Resource, Gene Ontology 2026-08-08 11:57:47 12993
Time Event Ontology
 
Resource Report
Resource Website
Time Event Ontology (RRID:SCR_000310) TEO ontology, data or information resource, controlled vocabulary Ontology for representing events, time, and their relationships. owl is listed by: BioPortal nlx_157610 SCR_000310 2026-08-08 11:57:19 0
Variation Ontology
 
Resource Report
Resource Website
Variation Ontology (RRID:SCR_000311) VARIO ontology, data or information resource, controlled vocabulary An ontology for standardized, systematic description of effects, consequences and mechanisms of variations. obo is listed by: BioPortal nlx_157622 SCR_000311 2026-08-08 11:57:14 0

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    5. Using autocomplete specifies which branch of our semantics you with to search and can help refine your search
  5. Collections

    If you are logged into ASWG you can add data records to your collections to create custom spreadsheets across multiple sources of data.

  6. Facets

    Here are the facets that you can filter the data by.

  7. Further Questions

    If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.