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URL: http://eagl.unige.ch/GOCat/
Proper Citation: GOCat (RRID:SCR_003608)
Description: Software tool that uses a machine learning (ML) approach to classify text, based on the Gene Ontology. It relies on a k-Nearest Neighbours algorithm, a simple algorithm which assigns to a new text the categories that are the most prevalent among the k most similar instances contained in the knowledge base. The ML classifier operates in two steps and combines two components. First, a related article search engine retrieves instances (i.e. abstracts) in the knowledge base that are the most similar to the input text (its nearest neighbours); second, a score computer infers the functional profile from the k most similar instances.
Abbreviations: GOCat
Synonyms: GOCat the Gene Ontology Categorizer, GOCat - the Gene Ontology Categorizer
Resource Type: service resource, data analysis service, software resource, production service resource, analysis service resource
Defining Citation: PMID:23842461
Keywords: machine learning, classification
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