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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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University of Washington Diabetes Research Center Resource Report Resource Website 1+ mentions |
University of Washington Diabetes Research Center (RRID:SCR_015126) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | University-affiliated center to support both basic and clinical research in diabetes and related metabolic disorders with the ultimate purpose of translating findings into opportunities to prevent these diseases and to improve clinical care and outcomes. | diabetes, metabolic disorder, clinical research |
is listed by: NIDDK Information Network (dkNET) is affiliated with: Diabetes Research Centers has parent organization: University of Washington; Seattle; USA is parent organization of: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility is parent organization of: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core is parent organization of: University of Washington Diabetes Research Center Cell Function Analysis Core Facility is parent organization of: University of Washington Diabetes Research Center Human Studies Core Facility is parent organization of: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core is parent organization of: University of Washington Diabetes Research Center Administrative Core has organization facet: University of Washington Diabetes Research Center Administrative Core has organization facet: University of Washington Diabetes Research Center Cell Function Analysis Core Facility has organization facet: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core has organization facet: University of Washington Diabetes Research Center Human Studies Core Facility has organization facet: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core Facility has organization facet: University of Washington Diabetes Research Center Vector and Transgenic Mouse Core is organization facet of: Diabetes Research Centers |
Diabetes | NIDDK P30DK017047 | Available to the research community | SCR_015126 | SciCrunch Registry | 2026-11-07 11:58:09 | 2 | ||||||||
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Johns Hopkins University - University of Maryland Diabetes Research Center Resource Report Resource Website |
Johns Hopkins University - University of Maryland Diabetes Research Center (RRID:SCR_015086) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center whose goal is to understand the causes of both type 1 and 2 diabetes and promotes translational research that is aimed at reducing the burden of these diseases in the U.S. It has a specific focus on childhood diabetes and diabetes that affects minority populations. | diabetes research, child diabetes, endocrinology |
is listed by: NIDDK Information Network (dkNET) has parent organization: Johns Hopkins University School of Medicine; Baltimore, Maryland; USA has parent organization: University of Maryland; Maryland; USA is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core is parent organization of: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Administrative Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Cell Biology Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Integrated Physiology Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Gene Editing Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Molecular and Translational Genomics Core has organization facet: Johns Hopkins University - University of Maryland Diabetes Research Center Health and Populations Science Core is organization facet of: Diabetes Research Centers |
Type 1 diabetes, Type 2 diabetes, Diabetes | NIDDK P30DK079637 | Available to the research community | SCR_015086 | SciCrunch Registry | 2026-11-07 11:58:08 | 0 | ||||||||
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MeroX Resource Report Resource Website 50+ mentions |
MeroX (RRID:SCR_014956) | data analysis software, data processing software, sequence analysis software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 29,2023. Software tool for the analysis of cross-linking/mass spectrometry datasets using MS-cleavable cross-linkers. MeroX is specialized for MS/MS-cleavable cross linking reagents and identifies the specific fragmentation products of the cleavable cross links. | sequence analysis software, cross linking, mass spectrometry, MS cleavage, fragmentation, cleavable cross link, bio.tools |
is listed by: Debian is listed by: bio.tools is related to: StavroX |
PMID:25261217 | THIS RESOURCE IS NO LONGER IN SERVICE | BioTools:MeroX, biotools:MeroX | https://bio.tools/MeroX, https://bio.tools/MeroX, https://bio.tools/MeroX | SCR_014956 | SciCrunch Registry | 2026-11-07 11:58:23 | 74 | |||||||
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Brown Family Enterprises Resource Report Resource Website |
Brown Family Enterprises (RRID:SCR_014953) | biomaterial supply resource, material resource, organism supplier | Research facility and licensed commercial research animal breeder that specializes in custom polyclonal antibody production, contract research, animal models for research, and animal tissue procurement. Brown Family Enterprises can make and distribute custom polyclonal antibodies using rabbits, goats, sheep, and horses. | polyclonal antibody, custom antibody, animal model, animal blood product, animal breeder, Brown Research, tissue procurement, rabbit, goat, sheep, horse | Commercially available | http://brownfamilyenterprises.com/oldmain.htm | http://brownfamilyenterprises.com/oldmain.htm | SCR_014953 | SciCrunch Registry | Brown Family Enterprises LLC | 2026-11-07 11:57:57 | 0 | ||||||||
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BUSCO Resource Report Resource Website 5000+ mentions |
BUSCO (RRID:SCR_015008) | algorithm resource, data analysis software, data processing software, software application, software resource | Software tool to quantitatively measure genome assembly and annotation completeness based on evolutionarily informed expectations of gene content. | genome assembly, annotation completeness, quantitative method, bio.tools |
is used by: rnaQUAST is recommended by: CEGMA is listed by: Debian is listed by: bio.tools is related to: CEGMA works with: BUSCOMP |
Marie Curie International Outgoing Fellowship ; Swiss National Science Foundation |
DOI:10.1093/bioinformatics/btv351 | Free, Available for download, Freely available | biotools:busco | https://gitlab.com/ezlab/busco, https://bio.tools/busco, https://sources.debian.org/src/busco/ | SCR_015008 | SciCrunch Registry | BUSCO v2, Benchmarking Universal Single-Copy Orthologs (BUSCO), Benchmarking Universal Single-Copy Orthologs, BUSCO v1 | 2026-11-07 11:58:07 | 8320 | |||||
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C.M. Rick Tomato Genetic Resources Center Resource Report Resource Website 100+ mentions |
C.M. Rick Tomato Genetic Resources Center (RRID:SCR_014954) | TGRC | biomaterial supply resource, material resource, organism supplier | Genebank of wild relatives, monogenic mutants and miscellaneous genetic stocks of tomato. TGRC offers seed samples for free to researchers worldwide. | tomato, tomato genetics, solanum, lycopersicon, seed germination, monogenic mutants, genebank, FASEB list | UC Davis ; USDA ; California Tomato Research Institute ; TGRC endowment |
Free, Available to the research community | SCR_014954 | SciCrunch Registry | C.M. Rick Tomato Genetic Resources Center (TGRC), Tomato Genetic Resources Center | 2026-11-07 11:58:07 | 113 | ||||||||
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StavroX Resource Report Resource Website 50+ mentions |
StavroX (RRID:SCR_014957) | data analysis software, data processing software, sequence analysis software, software application, software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on June 29,2023. Software tool for analyzing cross-linking/mass spectrometry datasets using any bifunctional cross-linker. It can be used to identify cross links of peptides – such as DSS, BS3, Disulfides, and zero-length – in complex mixtures. | sequence analysis software, peptide, cross linking, mass spectrometry, bifunctional cross linker, complex mixture | is related to: MeroX | DFG Si 867/13-1; DFG Si 867/15-1; BMBF ProNet-T3; BMBF Project To-06 |
PMID:22038510 DOI:10.1007/s13361-011-0261-2 |
THIS RESOURCE IS NO LONGER IN SERVICE | SCR_014957 | SciCrunch Registry | 2026-11-07 11:58:20 | 75 | ||||||||
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VTK Resource Report Resource Website 50+ mentions |
VTK (RRID:SCR_015013) | data processing software, data visualization software, image processing software, software application, software resource, software toolkit | Cross-platform visualization software system for 3D computer graphics, image processing, and data visualization. Various visualization algorithms and advanced modeling techniques are supported within VTK, as well as parallel processing and interoperability with select databases. | open source visualization toolkit, visualization system, 3d computer graphics, image processing, FASEB list |
is used by: ParaView is used by: VolView is used by: Insight Segmentation and Registration Toolkit has parent organization: Kitware |
Open source, Available for download, Acknowledgement requested | https://gitlab.kitware.com/vtk/vtk | SCR_015013 | SciCrunch Registry | VTK 7.0.0, Visualization Toolkit, VTK 7.1 | 2026-11-07 11:57:58 | 98 | ||||||||
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Mayo Clinic Center for Cell Signaling in Gastroenterology Resource Report Resource Website |
Mayo Clinic Center for Cell Signaling in Gastroenterology (RRID:SCR_015224) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center whose mission is to improve understanding of the signaling pathways that control the function of gastrointestinal cells in health and disease. It serves as a hub that provides access to research resources and expertise to multidisciplinary groups of basic scientists and clinical researchers. | C-SiG, gastroenterology, cell signaling, gastrointestinal diseases |
is listed by: NIDDK Information Network (dkNET) has parent organization: Mayo Clinic is parent organization of: Mayo Clinic Center for Cell Signaling in Gastroenterology Clinical Core is parent organization of: Mayo Clinic Center for Cell Signaling in Gastroenterology Optical Microscopy Core has organization facet: Mayo Clinic Center for Cell Signaling in Gastroenterology Clinical Core has organization facet: Mayo Clinic Center for Cell Signaling in Gastroenterology Gene Editing and Cell Engineering Core has organization facet: Mayo Clinic Center for Cell Signaling in Gastroenterology Optical Microscopy Core is organization facet of: Digestive Disease Centers |
NIDDK P30DK084567 | Available to Mayo Clinic researchers, Limited availability to the research community | SCR_015224 | SciCrunch Registry | 2026-11-07 11:58:24 | 0 | |||||||||
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Georgia Center for Diabetes Translation Research Resource Report Resource Website |
Georgia Center for Diabetes Translation Research (RRID:SCR_015185) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center for translational research on type 2 diabetes with a strong emphasis on translation into real world health care settings and communities. | type 2 diabetes research, implementation research, translational research, emory university, georgia tech |
is listed by: NIDDK Information Network (dkNET) is affiliated with: Centers for Diabetes Translation Research has parent organization: Emory University; Georgia; USA has parent organization: Georgia Institute of Technology; Georgia; USA has parent organization: Morehouse School of Medicine; Georgia; USA is parent organization of: Georgia Center for Diabetes Translation Research Design and Evaluation Core Facility is parent organization of: Georgia Center for Diabetes Translation Research Disparities Core is parent organization of: Georgia Center for Diabetes Translation Research Engagement and Behavior Change Core has organization facet: Georgia Center for Diabetes Translation Research Design and Evaluation Core Facility has organization facet: Georgia Center for Diabetes Translation Research Engagement and Behavior Change Core has organization facet: Georgia Center for Diabetes Translation Research Disparities Core is organization facet of: Centers for Diabetes Translation Research |
Diabetes | NIDDK P30DK111024 | Available to the research community | SCR_015185 | SciCrunch Registry | 2026-11-07 11:58:25 | 0 | ||||||||
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LDAK Resource Report Resource Website 100+ mentions |
LDAK (RRID:SCR_015504) | data analysis software, data processing software, software application, software resource | Software that analyzes and estimates heritability. LDAK adjusts for linkage disequilibrium (LD) by calculating SNP weightings which downweight the contribution of SNPs in highly tagged regions. | linkage disequilibrium, ld, snp, snp weight, heritability | PMID:28530675 | Free, Available for download | SCR_015504 | SciCrunch Registry | 2026-11-07 11:58:02 | 124 | ||||||||||
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GIIRA Resource Report Resource Website 1+ mentions |
GIIRA (RRID:SCR_015507) | data analysis software, data processing software, sequence analysis software, software application, software resource | Gene prediction method that identifies potential coding regions based on the mapping of reads from an RNA-Seq experiment. | gene prediction, rna seq, coding region, potential coding region |
is listed by: Debian is listed by: OMICtools |
DOI:10.1093/bioinformatics/btt577 | Available for download | OMICS_07360 | http://www.rki.de/EN/Content/Institute/DepartmentsUnits/JuniorGroups/JRG4.html, https://sources.debian.org/src/giira/ | SCR_015507 | SciCrunch Registry | 2026-11-07 11:58:11 | 3 | |||||||
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USC Liver Transplant Program and Center for Liver Disease Resource Report Resource Website |
USC Liver Transplant Program and Center for Liver Disease (RRID:SCR_015237) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center whose goal is the facilitation and fostering of interdisciplinary collaborative research in the field of pathobiology of diseases of the liver and digestive tract and the development of new treatments for these diseases. | liver disease, digestive disease |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of Southern California Keck School of Medicine; California; USA is parent organization of: USC Liver Transplant Program and Center for Liver Disease Cell and Tissue Imaging Core is parent organization of: USC Liver Transplant Program and Center for Liver Disease Cell Separation and Culture Core is parent organization of: USC Liver Transplant Program and Center for Liver Disease Analytical Metabolic Instrumentation Core is parent organization of: USC Liver Transplant Program and Center for Liver Disease Liver Histology Core has organization facet: USC Liver Transplant Program and Center for Liver Disease Cell Separation and Culture Core has organization facet: USC Liver Transplant Program and Center for Liver Disease Cell and Tissue Imaging Core has organization facet: USC Liver Transplant Program and Center for Liver Disease Liver Histology Core has organization facet: USC Liver Transplant Program and Center for Liver Disease Analytical Metabolic Instrumentation Core is organization facet of: Digestive Disease Centers |
liver disease | NIDDK P30DK048522 | Available to the research community | SCR_015237 | SciCrunch Registry | 2026-11-07 11:58:09 | 0 | ||||||||
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Columbia University George M. O'Brien Urology Center Resource Report Resource Website |
Columbia University George M. O'Brien Urology Center (RRID:SCR_015479) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center that brings together research programs in human genetics and mouse models to address the causes of congenital urinary tract malformations. | congenital urinary tract malformation, human genetic, mouse model |
is listed by: NIDDK Information Network (dkNET) is listed by: Collaborating for the Advancement of Interdisciplinary Research in Benign Urology has parent organization: Columbia University; New York; USA is organization facet of: O'Brien Urology Centers |
urinary tract malformation | NIDDK U54DK104309 | Available to the research community | SCR_015479 | SciCrunch Registry | 2026-11-07 11:58:26 | 0 | ||||||||
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ClinicalStudyDataRequest.com (CSDR) Resource Report Resource Website 1+ mentions |
ClinicalStudyDataRequest.com (CSDR) (RRID:SCR_015512) | CSDR | consortium, data or information resource, organization portal, portal | Consortium of clinical study data providers. Its aim is to help the data sharing community drive scientific progress and improve medical care by facilitating access to patient-level data from clinical studies. | clinical study, data-sharing, patient-level data, study sponsor | The research community can contribute to this resource, Freely Available | SCR_015512 | SciCrunch Registry | ClinicalStudyDataRequest, Clinical Study Data Request, ClinicalStudyDataRequest.com | 2026-11-07 11:58:27 | 9 | |||||||||
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MagicBlast Resource Report Resource Website 10+ mentions |
MagicBlast (RRID:SCR_015513) | data analysis software, data processing software, sequence analysis software, software application, software resource | Software tool for making a BLAST database from various data structures. It maps large sets of next-generation RNA or DNA sequencing runs against a whole genome or transcriptome. | blast database, blast, next generation rna sequencing, next generation dna sequencing | has parent organization: NCBI | Public, Free, Acknowledgement requested, Available for download, Available for LINUX, Available for MacOSX, Available for Windows | https://ncbiinsights.ncbi.nlm.nih.gov/tag/magic-blast/ | SCR_015513 | SciCrunch Registry | Magic-Blast, Magic - Blast, Magic Blast | 2026-11-07 11:58:02 | 12 | ||||||||
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MMPC-University of California Davis Resource Report Resource Website 50+ mentions |
MMPC-University of California Davis (RRID:SCR_015357) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center that provides the scientific community with metabolic and physiologic phenotyping tests, services, and procedures for mouse models of diabetes, diabetic complications, obesity and related disorders in order to advance medical and biological research. | mouse biology, metabolic phenotyping, mutant mouse models, MMPC |
is listed by: NIDDK Information Network (dkNET) has parent organization: University of California at Davis; California; USA has parent organization: National Mouse Metabolic Phenotyping Centers is parent organization of: MMPC-University of California Davis Energy Balance Exercise and Behavior Core is parent organization of: MMPC-University of California Davis Administrative Core is parent organization of: MMPC-University of California Davis Microbiome and Host Response Core is parent organization of: MMPC-University of California Davis Endocrinology and Metabolism Core is parent organization of: MMPC-University of California Davis Animal Care Surgery and Pathology Core is parent organization of: University of California Davis DNA Technologies and Expression Analysis Core Facility has organization facet: MMPC-University of California Davis Administrative Core has organization facet: MMPC-University of California Davis Animal Care Surgery and Pathology Core has organization facet: MMPC-University of California Davis Endocrinology and Metabolism Core has organization facet: MMPC-University of California Davis Energy Balance Exercise and Behavior Core has organization facet: MMPC-University of California Davis Microbiome and Host Response Core is organization facet of: National Mouse Metabolic Phenotyping Centers |
NIDDK DK092993 | Available to the research community | SCR_015357 | SciCrunch Registry | 2026-11-07 11:58:25 | 75 | |||||||||
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Marion Bessin Liver Research Center Resource Report Resource Website |
Marion Bessin Liver Research Center (RRID:SCR_015190) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Center that conducts scientific investigation to understand fundamental mechanisms of normal liver function, alterations in these functions resulting from metabolic disorders, genetic diseases, acute and chronic liver injury, hepatitis virus infection, hepatic fibrosis and liver cancer, and ways to overcome these abnormalities through methods of genetic engineering, gene therapy and liver cell transplantation. | liver research, genetic diseases, metabolic diseases research |
is listed by: NIDDK Information Network (dkNET) has parent organization: Albert Einstein College of Medicine; New York; USA is parent organization of: Marion Bessin Liver Research Center Genetic Engineering and Gene Therapy is parent organization of: Molecular Biology and Next Generation Technology is parent organization of: Marion Bessin Liver Research Center Imaging and Cell Structure is parent organization of: Marion Bessin Liver Research Center Animal Models Stem Cells and Cell Therapy has organization facet: Marion Bessin Liver Research Center Animal Models Stem Cells and Cell Therapy has organization facet: Marion Bessin Liver Research Center Imaging and Cell Structure has organization facet: Marion Bessin Liver Research Center Genetic Engineering and Gene Therapy has organization facet: Molecular Biology and Next Generation Technology has organization facet: Marion Bessin Liver Research Center Administrative and Supporting Services is organization facet of: Digestive Disease Centers |
liver disease | NIDDK P30DK041296 | Available to the research community | SCR_015190 | SciCrunch Registry | 2026-11-07 11:57:59 | 0 | ||||||||
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Pennington Biomedical Research Center Nutrition and Obesity Research Center Resource Report Resource Website 1+ mentions |
Pennington Biomedical Research Center Nutrition and Obesity Research Center (RRID:SCR_015438) | access service resource, data or information resource, disease-related portal, portal, resource, service resource, topical portal | Research center that supports clinical investigation addressing the etiology of nutritionally induced chronic diseases across the entire age span, from gestational and perinatal development through childhood and adolescence. It provides core services to promote the investigations around the theme of molecular mechanisms of nutritional programming induced by environmental factors. | nutritional research center, nutritional research services, chronic nutritional disease |
is listed by: NIDDK Information Network (dkNET) has parent organization: Pennington Biomedical Research Center is parent organization of: Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core is parent organization of: Pennington Biomedical Research Center Nutrition and Obesity Research Center Molecular Mechanisms Core is parent organization of: Pennington Biomedical Research Center Nutrition and Obesity Research Center Human Phenotyping Core has organization facet: Louisiana State University Pennington Biomedical Nutrition Obesity Research Center Core Facility has organization facet: Pennington Biomedical Research Center Nutrition and Obesity Research Center Human Phenotyping Core has organization facet: Pennington Biomedical Research Center Nutrition and Obesity Research Center Molecular Mechanisms Core has organization facet: Pennington Biomedical Research Center Nutrition and Obesity Research Center Animal Models and Phenotyping Core is organization facet of: Nutrition and Obesity Research Centers |
Obesity | NIDDK P30DK072476 | Available to the research community, Acknowledgement requested | SCR_015438 | SciCrunch Registry | 2026-11-07 11:58:01 | 3 | ||||||||
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Hematology Centers Resource Report Resource Website |
Hematology Centers (RRID:SCR_015321) | data or information resource, disease-related portal, organization portal, portal, resource, topical portal | Online portal with thorough information about hematology research centers and cores. Each entry details the center's research aims, its activities and core services, and links to pilot programs. | hematology research, online portal, research aims, niddk |
is listed by: NIDDK Information Network (dkNET) is affiliated with: NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases has organization facet: Fred Hutchinson Cancer Research Center Co-operative Center for Excellence in Hematology has organization facet: Center for Iron and Heme Disorders at the University of Utah has organization facet: Indiana University Cooperative Center of Excellence in Hematology has organization facet: Yale Cooperative Center of Excellence in Hematology has organization facet: Boston Children's Hospital Center of Excellence in Molecular Hematology |
Diabetes, digestive disease, kidney disease | NIDDK U54 RFA-DK15-021 | Available to the research community | SCR_015321 | SciCrunch Registry | 2026-11-07 11:58:25 | 0 |
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