Proper Citation: Spark (RRID:SCR_006207)
Description: A clustering and visualization tool that enables the interactive exploration of genome-wide data, with a specialization in epigenomics data. Spark is also available as a service within the Epigenome toolset of the Genboree Workbench. The approach utilizes data clusters as a high-level visual guide and supports interactive inspection of individual regions within each cluster. The cluster view links to gene ontology analysis tools and the detailed region view connects to existing genome browser displays taking advantage of their wealth of annotation and functionality.
Abbreviations: Spark
Synonyms: Sparkinsight
Resource Type: data processing software, data visualization software, data analysis software, software application, software resource
Defining Citation: PMID:22960372
Keywords: epigenomics, genome browser, clustering, visualization, genome, computation, pattern discovery, cluster
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