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The E3/E4 ubiquitin ligase UFD-2 suppresses normal and oncogenic signaling mediated by a Raf ortholog in Caenorhabditis elegans.

Robert Townley | Augustin Deniaud | Kennedy S Stacy | Claudia S Rodriguez Torres | Fatemeh Cheraghi | Nicole B Wicker | Claire C de la Cova
Science signaling | 2023

Signaling by the kinase cascade composed of Raf, MEK, and ERK is critical for animal development and is often inappropriately activated in human malignancies. We sought to identify factors that control signaling mediated by the Caenorhabditis elegans Raf ortholog LIN-45. A genetic screen showed that the degradation of LIN-45 required the E3/E4 ubiquitin ligase UFD-2. Both UFD-2 and its partner, the ATP-dependent segregase CDC-48, were required for the developmental regulation of LIN-45 protein abundance. We showed that UFD-2 acted in the same pathway as the E3 ubiquitin ligase SCFSEL-10 to decrease LIN-45 abundance in cells in which Raf-MEK-ERK signaling was most highly active. UFD-2 also reduced the protein abundance of activated LIN-45 carrying a mutation equivalent to the cancer-associated BRAF(V600E) variant. Our structure-function studies showed that the disruption of LIN-45 domains that mediate protein-protein interactions, including the conserved cysteine-rich domain and 14-3-3 binding motifs, were required for UFD-2-independent degradation of LIN-45. We propose a model in which UFD-2 and CDC-48 act downstream of SCFSEL-10 to remove LIN-45 from its protein interaction partners and facilitate proteasomal targeting and degradation. These findings imply that UFD-2 and CDC-48 may be important for Raf degradation during normal and oncogenic Ras and MAPK signaling in mammalian cells.

Pubmed ID: 37643243

Associated grants

  • Agency: NIH HHS, United States
    Id: P40 OD010440
  • Agency: NCI NIH HHS, United States
    Id: R03 CA248684

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Caenorhabditis Genetics Center (tool)

RRID:SCR_007341

Center that acquires, maintains, and distributes genetic stocks and information about stocks of the small free-living nematode Caenorhabditis elegans for use by investigators initiating or continuing research on this genetic model organism. A searchable strain database, general information about C. elegans, and links to key Web sites of use to scientists, including WormBase, WormAtlas, and WormBook are available.

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PP198 (organism)

RRID:WB-STRAIN:WBStrain00030769

Caenorhabditis elegans with name ufd-2(tm1380) II. from WB.

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N2 (organism)

RRID:WB-STRAIN:WBStrain00000001

Caenorhabditis elegans with name Caenorhabditis elegans wild isolate. from WB.

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EJ521 (organism)

RRID:WB-STRAIN:WBStrain00007125

Caenorhabditis elegans with name lin-45(dx19) IV/nT1 [unc-?(n754) let-?] (IV;V). from WB.

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WU48 (organism)

RRID:WB-STRAIN:WBStrain00040569

Caenorhabditis elegans with name lin-45(n2018) dpy-20(e1282) IV. from WB.

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WU49 (organism)

RRID:WB-STRAIN:WBStrain00040570

Caenorhabditis elegans with name lin-45(n2506) unc-24(e138) IV. from WB.

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