NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases
Resource Report
Resource Website
100+ mentions
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NIDDK - National Institute of Diabetes and Digestive and Kidney Diseases (RRID:SCR_012895)
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NIDDK
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government granting agency
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Center with mission to conduct and support medical research and research training and to disseminate science-based information on diabetes and other endocrine and metabolic diseases. The NIDDK supports a wide range of medical research through grants to universities and other medical research institutions across the country.
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diabetes, metabolic disease, digestive, kidney, endocrine, medical research
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recommends: Cell Image Library (CIL)
recommends: Biological General Repository for Interaction Datasets (BioGRID)
recommends: NIDDK Central Repository
recommends: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D)
recommends: Metabolomics Workbench
recommends: PeptideAtlas
recommends: Network Data Exchange (NDEx)
recommends: Mouse Genome Informatics (MGI)
recommends: Zebrafish Information Network (ZFIN)
recommends: FlyBase
recommends: Database of Interacting Proteins (DIP)
recommends: WormBase
recommends: PhysioNet
recommends: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
recommends: UniProt
recommends: dbSNP
recommends: DNA DataBank of Japan (DDBJ)
recommends: European Nucleotide Archive (ENA)
recommends: dbVar
recommends: ClinicalTrials.gov
recommends: European Variation Archive (EVA)
recommends: MGnify
recommends: Analysis, Visualization, and Informatics Lab-space (AnVIL)
recommends: GenBank
recommends: Gene Expression Omnibus (GEO)
recommends: miRBase
recommends: Database of Genomic Variants Archive (DGVa)
recommends: Crystallography Open Database (COD)
recommends: Coherent X-Ray Imaging Data Bank (CXIDB)
recommends: Biological Magnetic Resonance Data Bank (BMRB)
recommends: Worldwide Protein Data Bank (wwPDB)
recommends: EMDataResource.org
recommends: NCBI Assembly Archive Viewer
recommends: Cambridge Crystallographic Data Centre (CCDC)
recommends: Inorganic Crystal Structure Database (ICSD)
recommends: Structural Biology Grid
recommends: ArrayExpress
recommends: GenomeRNAi
recommends: NCBI database of Genotypes and Phenotypes (dbGap)
recommends: Protein Circular Dichroism Data Bank (PCDDB)
recommends: Electron Microscopy Data Bank at PDBe (MSD-EBI)
recommends: PDBe - Protein Data Bank in Europe
recommends: PubChem BioAssay
recommends: Japanese Genotype-phenotype Archive (JGA)
recommends: ProteomeXchange
recommends: IntAct
recommends: European Genome phenome Archive
recommends: MetaboLights
recommends: PubChem Substance
recommends: The Immunology Database and Analysis Portal (ImmPort)
recommends: STRENDA
recommends: Kinetic Models of Biological Systems (KiMoSys)
recommends: FLOWRepository
recommends: Mass spectrometry Interactive Virtual Environment (MassIVE)
recommends: Global Proteome Machine Database (GPM DB)
recommends: Cancer Imaging Archive (TCIA)
recommends: German Neuroinformatics Node (G-Node)
recommends: 1000 Functional Connectomes Project
recommends: ChEMBL
recommends: Image Data Resource (IDR)
recommends: SICAS Medical Image Repository
recommends: ZENODO
recommends: Dataverse Network Project
recommends: NeuroMorpho.Org
recommends: Mendeley Data
recommends: NIMH Data Archive
recommends: NIH Figshare Archive
recommends: FigShare
recommends: National Addiction and HIV Data Archive Program (NAHDAP)
recommends: Dryad Digital Repository
recommends: Open Science Framework
recommends: OpenNeuro
recommends: SPARC Project
lists: Mutant Mouse Resource and Research Center
lists: NIDDK Research Resources
is affiliated with: Cystic Fibrosis Research and Translation Centers
is affiliated with: Nutrition and Obesity Research Centers
is affiliated with: O'Brien Urology Centers
is affiliated with: Hematology Centers
is affiliated with: Polycystic Kidney Disease Research and Translation Centers
is affiliated with: O'Brien Kidney Centers
is affiliated with: Diabetes Research Centers
is affiliated with: Digestive Disease Centers
is affiliated with: Centers for Diabetes Translation Research
is affiliated with: Pediatric Centers of Excellence in Nephrology
is affiliated with: Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study
is related to: Bridging Interventional Development Gaps
is related to: Polycystic Kidney Disease Research Resource Consortium
has parent organization: National Institutes of Health
is parent organization of: MTOPS Prostate Samples Analysis Consortium
is parent organization of: Symptom Score for Benign Prostatic Hyperplasia
is parent organization of: Type 1 Diabetes - Rapid Access to Intervention Development
is parent organization of: National Diabetes Education Program
is parent organization of: Family Investigation of Nephropathy of Diabetes
is parent organization of: Frequent Hemodialysis Network Daily Trial
is parent organization of: HemBase
is parent organization of: NIDDK- National Institute of Diabetes and Digestive and Kidney Diseases Obesity Resources
is parent organization of: dkCOIN
is parent organization of: National Kidney Disease Education Program
is parent organization of: Network of Minority Health Research Investigators
is parent organization of: National Endocrine and Metabolic Diseases Information Service
is parent organization of: National Diabetes Information Clearinghouse
is parent organization of: National Digestive Diseases Information Clearinghouse
is parent organization of: National Hematologic Diseases Information Service
is parent organization of: National Kidney and Urologic Diseases Information Clearinghouse
is parent organization of: Type 1 Diabetes Preclinical Testing Program
is parent organization of: Frequent Hemodialysis Network Nocturnal Trial
is parent organization of: Boston Area Community Health Survey
is parent organization of: Minimally Invasive Surgical Therapies Treatment Consortium for Benign Prostatic Hyperplasia
is parent organization of: Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study
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Type 1 diabetes, Type 2 diabetes, Diabetes, Digestive disease, Kidney disease, Endocrine disease, Obesity, Blood disease, Liver disease, Urologic disease |
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nlx_inv_1005102 |
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SCR_012895 |
National Institute of Diabetes and Digestive and Kidney Diseases |
2024-04-24 11:29:27 |
122 |
National Database for Clinical Trials related to Mental Illness
Resource Report
Resource Website
1+ mentions
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National Database for Clinical Trials related to Mental Illness (RRID:SCR_013795)
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NDCT
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data resource
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A database which houses human subjects clinical trial data. NDCT currently contains data on 13,409 subjects and has access to data on 100,500 subjects from the NIMH Data Archive. Users can also sign up for news updates and watch video tutorials.
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database, human, clinical trial, mental health, mental illness
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uses: NIMH Data Archive
uses: RDoCdb
is listed by: NIH Data Sharing Repositories
is related to: NIMH Data Archive
is related to: RDoCdb
is related to: RDoCdb
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NIH |
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Public, Only for research |
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SCR_013795 |
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2024-04-24 11:29:36 |
1 |
GUID Tool
Resource Report
Resource Website
1+ mentions
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GUID Tool (RRID:SCR_014530)
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web service, software resource, data access protocol
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A customized software application that generates a Global Unique Identifier for each study participant. The GUID is a universal subject ID that allows researchers to share data specific to a study participant without exposing personally identifiable information (PII). The GUID has been approved by the NIH Office of General Counsel.
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web service, universal subject id
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is hosted by: NIMH Data Archive
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For use when collaborating and sharing information |
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SCR_014530 |
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2024-07-03 10:40:53 |
3 |
NIMH CORTEX
Resource Report
Resource Website
10+ mentions
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NIMH CORTEX (RRID:SCR_006837)
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NIMH CORTEX
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data or information resource, portal, data processing software, topical portal, software toolkit, software application, software resource, data acquisition software
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A program developed by the NIMH Laboratory of Neuropsychology for data acquisition and experimental control of neurophysiological experiments. The purpose of this website is to make it easier to access new versions of NIMH CORTEX and its supporting documents. Ultimately, it is also hoped that these pages will make it easier for users to report bugs, request enhancements, and obtain help. Download the latest version and unzip it into a new sub-directory. Then read the on-line documentation. For the new user, the User''s Manuals are invaluable in specifying system requirements and giving an overview of the features and necessary hardware. The Function reference goes into more detail about how to write experiments using NIMH CORTEX. The Demos reference is a good place for new and experienced users to start to get an idea of what NIMH CORTEX can do these days.
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neurophysiology, neuropsychology, behavioral control
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has parent organization: NIMH Division of Intramural Research Programs
is parent organization of: MatOFF
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NIMH |
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nif-0000-04365 |
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http://www.cortex.salk.edu/ |
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SCR_006837 |
Laboratory of Systems Neuroscience, Software and Hardware for Neurophysiology: The home of NIMH Cortex, NIMH Laboratory of Systems Neuroscience |
2024-07-03 10:35:30 |
33 |
re3data.org
Resource Report
Resource Website
50+ mentions
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re3data.org (RRID:SCR_006782)
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re3data.org
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data or information resource, registry, database
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Global registry of research data repositories from all academic disciplines that allows the easy identification of appropriate research data repositories, both for data producers and users. Information icons display principal attributes of a repository that can be used for multi-faceted searches. Repository operators can suggest their infrastructures to be listed via a simple application form. A repository is indexed when the minimum requirements are met, i.e. mode of access to the data and repository, as well as the terms of use.
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vocabulary, registry, metadata standard, data sharing, FASEB list
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lists: Academic Seismic Portal at UTIG
lists: National Addiction and HIV Data Archive Program (NAHDAP)
lists: Alaska Climate Research Center
lists: MINT
lists: Internet Archive
lists: MatrixDB
lists: Animal QTLdb
lists: MPIDB
lists: BeetleBase
lists: Conserved Domain Database
lists: NeuroMorpho.Org
lists: Marine Geoscience Data System
lists: Cell Centered Database
lists: dbMHC
lists: Human Mortality Database
lists: UniProt
lists: Ligand-Gated Ion Channel Database
lists: EcoGene
lists: NCBI Genome
lists: ESTHER
lists: Genomes Online Database
lists: Gramene
lists: American FactFinder
lists: Human Proteinpedia
lists: IMGT/HLA
lists: Influenza Virus Resource
lists: DOE Joint Genome Institute
lists: MetaCrop
lists: ISPS Data Archive
lists: MorphBank
lists: miRBase
lists: Inter-university Consortium for Political and Social Research (ICPSR)
lists: Mouse Phenome Database (MPD)
lists: MorphoBank
lists: dbVar
lists: Open Science Framework
lists: TalkBank
lists: Nucleic Acid Database
lists: NCBI Taxonomy
lists: NCBI Protein Database
lists: PHI-base
lists: Alberta Geological Survey
lists: Protein Clusters
lists: Reactome
lists: Cell Image Library (CIL)
lists: eyeMoviePedia
lists: ALLBUS - German General Social Survey
lists: TPA
lists: Agency for Healthcare Research and Quality
lists: Alaska Satellite Facility
lists: Current German Weather Stations
lists: NCBI Structure
lists: BOLD
lists: PDBe - Protein Data Bank in Europe
lists: FishBase
lists: Nucleotide database
lists: NCBI BioSystems Database
lists: SGD
lists: Data.gov
lists: RHEA
lists: European Bioinformatics Institute
lists: NCBI Probe
lists: NCBI Nucleotide
lists: Database of Genomic Variants Archive (DGVa)
lists: NCBI Popset
lists: Whole Brain Atlas
lists: EMAGE Gene Expression Database
lists: Limited Access Datasets From NIMH Clinical Trials
lists: Tree of Life Web Project
lists: TreeBASE
lists: UCSC Genome Browser
lists: UniPROBE
lists: Crystallography Open Database (COD)
lists: National Archive of Computerized Data on Aging (NACDA)
lists: EOL - Encyclopedia of Life
lists: VectorBase
lists: caArray
lists: NCBI Epigenomics
lists: GWAS Central
lists: QTL Archive
lists: Proteome Commons
lists: XNAT Central
lists: 4TU.Datacentrum
lists: Amazon Web Services Public Data Sets
lists: ChemSpider
lists: DataStaR
lists: Rat Genome Database (RGD)
lists: Atlas of Living Australia
lists: Electron Microscopy Data Bank at PDBe (MSD-EBI)
lists: Phytozome
lists: FlyBase
lists: MaizeGDB
lists: Tuberculosis Database
lists: InterPro
lists: UNAVCO
lists: HPA
lists: InnateDB
lists: UniSTS
lists: Launchpad
lists: Surveillance Epidemiology and End Results
lists: FAOSTAT
lists: Adult Blood Lead Epidemiology and Surveillance Interactive Database
lists: HIstome: The Histone Infobase
lists: HPRD - Human Protein Reference Database
lists: Biological General Repository for Interaction Datasets (BioGRID)
lists: INFEVERS
lists: Reciprocal Net
lists: Africa Centre for Health and Population Studies
lists: BeeBase
lists: Biodiversity Heritage Library
lists: Databrary
lists: ACADIS Gateway
lists: ACEpepDB
lists: AIMS Data Centre
lists: ALADDIN
lists: ASTER
lists: Access to Archival Databases
lists: AidData
lists: Alaska Ocean Observing System
lists: J. Craig Venter Institute
lists: Wellcome Trust Sanger Institute; Hinxton; United Kingdom
lists: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
lists: myExperiment
lists: BioModels
lists: Addgene
lists: Antarctic and Southern Ocean Data Portal
lists: OpenTopography
lists: National Snow and Ice Data Center
lists: Biological Magnetic Resonance Data Bank (BMRB)
lists: dbSNP
lists: Ensembl
lists: DNA DataBank of Japan (DDBJ)
lists: Entrez Gene
lists: Zebrafish Information Network (ZFIN)
lists: GitHub
lists: DrugBank
lists: NCBI database of Genotypes and Phenotypes (dbGap)
lists: Gene Expression Nervous System Atlas
lists: SumsDB
lists: GenBank
lists: GermOnline
lists: HGNC
lists: Greengenes
lists: Neuroscience Information Framework
lists: HomoloGene
lists: ArrayExpress
lists: JASPAR
lists: WormBase
lists: Database of Interacting Proteins (DIP)
lists: EMDataResource.org
lists: ResearchCompendia
lists: Proteomics Identifications (PRIDE)
lists: RefSeq
lists: FAIRsharing
lists: PubChem
lists: FigShare
lists: UniGene
lists: NIMH Data Archive
lists: TAIR
lists: NCBI BioProject
lists: SMD
lists: OpenNeuro
lists: SoyBase
lists: Beta Cell Biology Consortium
lists: Biomedical Informatics Research Network
lists: Dryad Digital Repository
lists: Atlantic Canada Conservation Data Centre
lists: Agri-environmental Research Data Repository
lists: Australian Antarctic Data Centre
lists: Antibody Registry
lists: Mouse Genome Informatics (MGI)
lists: European Nucleotide Archive (ENA)
lists: NIDDK Central Repository
lists: GigaScience
lists: PeptideAtlas
lists: 1000 Genomes: A Deep Catalog of Human Genetic Variation
lists: IntAct
lists: fMRI Data Center
lists: Gene Expression Omnibus
lists: Data and Specimen Hub (NICHD DASH)
lists: NIDA Data Share
lists: The NINDS Human Cell and Data Repository (NHCDR)
lists: Microphysiology Systems Database
lists: Dataverse Network Project
lists: Mendeley Data
lists: Vivli
lists: Metabolomics Workbench
lists: Qualitative Data Repository
lists: Protocols.io
lists: ZENODO
lists: STRENDA
lists: Code Ocean
lists: Brain Image Library
lists: German Collection of Microorganisms and Cell Cultures
lists: INPTDAT
lists: DataONE
lists: GBIF - Global Biodiversity Information Facility
lists: Lamont-Doherty Core Repository
lists: CaltechDATA
lists: Synapse
lists: Incorporated Research Institutions for Seismology
lists: Cancer Imaging Archive (TCIA)
lists: Mendeley Data
lists: UK Data Archive
lists: GigaDB
lists: PhysioNet
lists: Project Data Sphere
lists: Influenza Research Database (IRD)
lists: Simtk.org
lists: ResearchGate
lists: Virus Pathogen Resource (ViPR)
lists: Cambridge Structural Data Base
lists: 4TU.ResearchData
lists: Aperta Turkey Open Archive
lists: Polar Data Catalogue
lists: Arch
lists: Australian Data Archive
lists: Australian Ocean Data Network
lists: Barbara A. Mikulski Archive for Space Telescopes
lists: Aston Data Explorer
lists: Birkbeck Research Data
lists: B2SHARE Eudat
lists: BioHeritage National Science Challenge Data Repository
lists: Bolin Centre Database
lists: Brown Digital Repository
is listed by: FORCE11
is related to: U.S. Census Bureau
is related to: Rat Genome Database (RGD)
is related to: ResearchCompendia
has parent organization: Humboldt University of Berlin; Berlin; Germany
has parent organization: Karlsruhe Institute of Technology; Karlsruhe; Germany
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DFG |
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The community can contribute to this resource |
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nlx_152589 |
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SCR_006782 |
Registry of Research Data Repositories, re3data.org: Registry of Research Data Repositories, re3data |
2024-07-03 10:35:29 |
60 |
National Institute of Mental Health
Resource Report
Resource Website
50+ mentions
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National Institute of Mental Health (RRID:SCR_011431)
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NIMH
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government granting agency
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National institute that is the largest scientific organization in the world dedicated to research focused on the understanding, treatment, and prevention of mental disorders and the promotion of mental health. NIMH envisions a world in which mental illnesses are prevented and cured. The mission of NIMH is to transform the understanding and treatment of mental illnesses through basic and clinical research, paving the way for prevention, recovery and cure. For the Institute to continue fulfilling this vital public health mission, it must foster innovative thinking and ensure that a full array of novel scientific perspectives are used to further discovery in the evolving science of brain, behavior, and experience. In this way, breakthroughs in science can become breakthroughs for all people with mental illnesses. In support of this mission, NIMH will generate research and promote research training to fulfill the following four objectives: * Promote discovery in the brain and behavioral sciences to fuel research on the causes of mental disorders * Chart mental illness trajectories to determine when, where, and how to intervene * Develop new and better interventions that incorporate the diverse needs and circumstances of people with mental illnesses * Strengthen the public health impact of NIMH-supported research To reach these goals, the NIMH divisions and programs are designed to emphasize translational research spanning bench, to bedside, to practice. For targeted priorities and funding initiatives, please visit our division websites
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lists: Neuroscience Information Framework
has parent organization: NIH Blueprint for Neuroscience Research
has parent organization: National Institutes of Health
is parent organization of: NIMH Educational Resources
is parent organization of: NIMH Multimedia
is parent organization of: NIMH Image Library
is parent organization of: NIMH Video
is parent organization of: NIMH Clinical Trials
is parent organization of: NIMH Resources for Research Training and Career Development
is parent organization of: NIMH Director's Blog
is parent organization of: NIMH Publications
is parent organization of: RDoC
is parent organization of: Neuroimaging Informatics Technology Initiative
is parent organization of: Neurophysiology Imaging Facility
is parent organization of: NIMH Data Archive
is parent organization of: MRI Research Safety and Ethics
is parent organization of: Analysis of Functional NeuroImages
is parent organization of: NIMH Division of Intramural Research Programs
is parent organization of: MicroSNiPer
is parent organization of: NIH Image
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nlx_inv_1005109 |
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SCR_011431 |
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2024-04-24 11:29:10 |
81 |
National Library of Medicine
Resource Report
Resource Website
100+ mentions
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National Library of Medicine (RRID:SCR_011446)
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NLM
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government granting agency
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NLM collects, organizes, and makes available biomedical science information to scientists, health professionals, and the public. The Library's Web-based databases, including PubMed/Medline and MedlinePlus, are used extensively around the world. NLM conducts and supports research in biomedical communications; creates information resources for molecular biology, biotechnology, toxicology, and environmental health; and provides grant and contract support for training, medical library resources, and biomedical informatics and communications research. Celebrating its 175th anniversary in 2011, the National Library of Medicine (NLM), in Bethesda, Maryland, is a part of the National Institutes of Health, U.S. Department of Health and Human Services (HHS). Since its founding in 1836 as the library of the U.S. Army Surgeon General, NLM has played a pivotal role in translating biomedical research into practice. It is the world's largest biomedical library and the developer of electronic information services that deliver trillions of bytes of data to millions of users every day. Scientists, health professionals, and the public in the United States and around the globe search the Library's online information resources more than 1 billion times each year. The Library is open to all and has many services and resources for scientists, health professionals, historians, and the general public. NLM has over 17 million books, journals, manuscripts, audiovisuals, and other forms of medical information on its shelves, making it the largest health-science library in the world. In today's increasingly digital world, NLM carries out its mission of enabling biomedical research, supporting health care and public health, and promoting healthy behavior by: * Acquiring, organizing, and preserving the world's scholarly biomedical literature; * Providing access to biomedical and health information across the country in partnership with the 5,800-member National Network of Libraries of Medicine (NN/LM); * Serving as a leading global resource for building, curating and providing sophisticated access to molecular biology and genomic information, including those from the Human Genome Project and NIH Common Fund; * Creating high-quality information services relevant to toxicology and environmental health, health services research, and public health; * Conducting research and development on biomedical communications systems, methods, technologies, and networks and information dissemination and utilization among health professionals, patients, and the general public; * Funding advanced biomedical informatics research and serving as the primary supporter of pre- and post-doctoral research training in biomedical informatics at 18 U.S. universities.
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is used by: DisGeNET
recommends: Brain Image Library
recommends: Data Archive BRAIN Initiative
recommends: OpenNeuro
recommends: Brain Observatory Storage Service
recommends: CRCNS
recommends: NCBI database of Genotypes and Phenotypes (dbGap)
recommends: NIMH Data Archive
recommends: ENCODE
recommends: Genotype-Tissue Expression
recommends: HMP Data Analysis and Coordination Center
recommends: Illuminating the Druggable Genome
recommends: Kids First Data Resource Portal
recommends: HMS LINCS Database
recommends: Metabolomics Workbench
recommends: Patient-Reported Outcomes Measurement Information System
recommends: Cancer Nanotechnology Laboratory (caNanoLab)
recommends: Cancer Imaging Archive (TCIA)
recommends: Network Data Exchange (NDEx)
recommends: eyeGENE
recommends: National Eye Institute (NEI) Commons
recommends: National Sleep Research Resource (NSRR)
recommends: CardioVascular Research Grid (CVRG)
recommends: AMP-AD Knowledge Portal
recommends: National Archive of Computerized Data on Aging (NACDA)
recommends: National Institute on Aging Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS)
recommends: Immune Tolerance Network TrialShare
recommends: The Immunology Database and Analysis Portal (ImmPort)
recommends: VectorBase
recommends: Virus Pathogen Resource (ViPR)
recommends: LONI Image and Data Archive
recommends: NeuroImaging Tools and Resources Collaboratory (NITRC)
recommends: Child Language Data Exchange System (CHILDES)
recommends: Data and Specimen Hub (NICHD DASH)
recommends: National Children's Study (NCS) Archive
recommends: PhonBank
recommends: Archive of Data on Disability to Enable Policy (ADDEP)
recommends: National Addiction and HIV Data Archive Program (NAHDAP)
recommends: Neuroscience Information Framework
recommends: National Institute on Drug Abuse Center for Genetic Studies
recommends: NIDA Data Share
recommends: AphasiaBank
recommends: FluencyBank
recommends: NIDDK Central Repository
recommends: NIDDK Information Network (dkNET)
recommends: Nuclear Receptor Signaling Atlas
recommends: Chemical Effects in Biological Systems (CEBS)
recommends: Cell Image Library (CIL)
recommends: PhysioNet
recommends: Transporter Classification Database
recommends: Biological General Repository for Interaction Datasets (BioGRID)
recommends: Federal Interagency Traumatic Brain Injury Research Informatics System
recommends: NeuroMorpho.Org
recommends: Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR)
recommends: The NINDS Human Cell and Data Repository (NHCDR)
recommends: ClinicalTrials.gov
recommends: dbSNP
recommends: dbVar
recommends: GenBank
recommends: Gene Expression Omnibus (GEO)
recommends: NCBI Sequence Read Archive (SRA)
recommends: 1000 Functional Connectomes Project
recommends: exRNA Atlas
recommends: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D)
recommends: PeptideAtlas
recommends: Zebrafish Information Network (ZFIN)
recommends: FlyBase
recommends: Database of Interacting Proteins (DIP)
recommends: Mouse Genome Informatics (MGI)
recommends: UniProt
recommends: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
recommends: European Nucleotide Archive (ENA)
recommends: Analysis, Visualization, and Informatics Lab-space (AnVIL)
recommends: DNA DataBank of Japan (DDBJ)
recommends: UniProtKB
recommends: SPARC Project
is related to: CureHunter
is related to: Entrez
has parent organization: National Institutes of Health
is parent organization of: MalariaWorld
is parent organization of: GenNav
is parent organization of: NIH Common Data Element Repository
is parent organization of: MEDLINE
is parent organization of: ClinicalTrials.gov
is parent organization of: Developmental and Reproductive Toxicology Database
is parent organization of: Directory of Health Organizations Online
is parent organization of: Haz-Map: Occupational Exposure to Hazardous Agents
is parent organization of: Hazardous Substances Data Bank
is parent organization of: Drug Information Portal
is parent organization of: NIH Data Sharing Repositories
is parent organization of: MeSH
is parent organization of: Unified Medical Language System
is parent organization of: NCBI
is parent organization of: MedlinePlus
is parent organization of: RxNorm
is parent organization of: Bibliography on Alternatives to the Use of Live Vertebrates in Biomedical Research and Testing
is parent organization of: Chemical Carcinogenesis Research Information System
is parent organization of: International Toxicity Estimates for Risk
is parent organization of: BLAST Assembled RefSeq Genomes
is parent organization of: Cross-Sectional and Longitudinal Aging Study
is parent organization of: OrbitProject
is parent organization of: Household Products Database
is parent organization of: Entrez Utilities
is parent organization of: Epidemiology of Chronic Disease in the Oldest Old
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nlx_inv_1005117 |
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SCR_011446 |
U.S. National Library of Medicine |
2024-04-24 11:29:12 |
368 |
NIDDK Information Network (dkNET)
Resource Report
Resource Website
10+ mentions
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NIDDK Information Network (dkNET) (RRID:SCR_001606)
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dkNET
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data or information resource, community building portal, database, portal
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The NIDDK Information Network (dkNET) is a community-based network to serve needs of basic and clinical investigators that includes large pools of data and research resources relevant to mission of National Institute of Diabetes and Digestive and Kidney Disease.
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dknet, data resource, diabetes, kidney, liver, disease, urology, hematology, digestive, nutrition, endocrine, obesity, metabolic
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uses: NIDDK Central Repository
uses: Addgene
uses: NIF Data Federation
uses: Antibody Registry
uses: Nuclear Receptor Signaling Atlas
uses: GenitoUrinary Development Molecular Anatomy Project
uses: Diabetic Complications Consortium
uses: National Mouse Metabolic Phenotyping Centers
uses: T1DBase
uses: Beta Cell Biology Consortium
uses: Grants.gov
uses: dkNET Community Pilot Funding Opportunities
uses: Integrated Grants
uses: ClinicalTrials.gov
uses: Integrated Animals
uses: Intestinal Stem Cell Consortium
recommends: Biological General Repository for Interaction Datasets (BioGRID)
recommends: Cell Image Library (CIL)
recommends: Accelerating Medicines Partnership Type 2 Diabetes Knowledge Portal (AMP-T2D)
recommends: NIDDK Central Repository
recommends: Network Data Exchange (NDEx)
recommends: PeptideAtlas
recommends: International Mouse Phenotyping Consortium (IMPC)
recommends: FlyBase
recommends: Metabolomics Workbench
recommends: Zebrafish Information Network (ZFIN)
recommends: Mouse Genome Informatics (MGI)
recommends: Database of Interacting Proteins (DIP)
recommends: UniProt
recommends: PhysioNet
recommends: Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB)
recommends: ClinicalTrials.gov
recommends: dbVar
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recommends: MGnify
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recommends: Gene Expression Omnibus (GEO)
recommends: NCBI Assembly Archive Viewer
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recommends: Crystallography Open Database (COD)
recommends: PDBj - Protein Data Bank Japan
recommends: Inorganic Crystal Structure Database (ICSD)
recommends: Structural Biology Grid
recommends: NCBI database of Genotypes and Phenotypes (dbGap)
recommends: ArrayExpress
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lists: University of North Carolina at Chapel Hill Nutrition and Obesity Research Center Research Facilitation Program
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lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Cell Morphology Core
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lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis
lists: University of Pennsylvania Center for Molecular Therapy for Cystic Fibrosis Vector Core Facility
lists: University of Washington Diabetes Research Center Administrative Core
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lists: University of Washington Diabetes Research Center Cellular and Molecular Imaging Core
lists: University of Washington Diabetes Research Center Human Studies Core
lists: University of Washington Diabetes Research Center Quantitative and Functional Proteomics Core
lists: University of Washington Diabetes Research Center
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lists: Vanderbilt Diabetes Research and Training Center Cell Imaging Shared Resource Core Facility
lists: Vanderbilt Diabetes Research and Training Center Hormone Assay and Analytical Services Core Facility
lists: Vanderbilt Diabetes Research and Training Center Islet Procurement and Analysis Core
lists: Vanderbilt Diabetes Research and Training Center Metabolic Physiology Shared Resource
lists: Vanderbilt Diabetes Research and Training Center
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lists: Vanderbilt Diabetes Research and Training Center Vanderbilt Diet Body Composition and Metabolism Core Facility
lists: Vanderbilt Digestive Disease Research Center Bioanalytical Mass Spectrometry and Proteomics Core
lists: Vanderbilt Digestive Disease Research Center Cellular Imaging Core
lists: Vanderbilt Digestive Disease Research Center Flow Cytometry Core
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lists: University of Washington Nutrition and Obesity Research Center Adipose Tissue and Obesity Core
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is related to: Congressionally Directed Medical Research Program
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is related to: National Endocrine and Metabolic Diseases Information Service
is related to: Kidney and Urinary Pathway Ontology
is related to: National Diabetes Information Clearinghouse
is related to: Digestive Diseases Statistics for the United States
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is related to: Diabetes Control and Complications Trial
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is related to: Nonhuman Primate Transplantation Tolerance Cooperative Study Group
is related to: Type 1 Diabetes Preclinical Testing Program
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is related to: Minimally Invasive Surgical Therapies Treatment Consortium for Benign Prostatic Hyperplasia
is related to: Focal Segmental Glomerulosclerosis in Children and Young Adults Interventional Study
is related to: Complementary and Alternative Medicine for Urological Symptoms
is related to: Mouse Mutagenesis Center for Developmental Defects
is related to: CARDS Database
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is related to: Renal Disease Portal
is related to: Renin Angiotensin System Study
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has parent organization: SciCrunch
has parent organization: University of California at San Diego; California; USA
|
Digestive disease, Kidney disease, Diabetes, Metabolic disease, Endocrine disease, Obesity, Urologic disease, Type 1 diabetes, Type 2 diabetes |
NIDDK |
PMID:26393351 |
Free, Freely available |
|
nlx_153866 |
http://scicrunch.org/dknet |
|
|
SCR_001606 |
National Institute of Diabetes and Digestive and Kidney Disease Information Network, NIDDK Information Network, DKnet, NIDDKInformation Network |
2024-07-03 10:31:05 |
17 |
NeuroImaging Tools and Resources Collaboratory (NITRC)
Resource Report
Resource Website
100+ mentions
|
NeuroImaging Tools and Resources Collaboratory (NITRC) (RRID:SCR_003430)
|
NITRC
|
data or information resource, portal, storage service resource, service resource, community building portal, software resource, data repository, software repository
|
Software repository for comparing structural (MRI) and functional neuroimaging (fMRI, PET, EEG, MEG) software tools and resources. NITRC collects and points to standardized information about structural or functional neuroimaging tool or resource.
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collaboration, information, resource, structural, functional, neuroimaging, MRI, fMRI, EEG, MEG, PET
|
is used by: NIF Data Federation
is used by: Consortium for Reliability and Reproducibility
is used by: DataLad
is recommended by: National Library of Medicine
lists: Dipy
lists: 3DMeshMetric
lists: MPScope
lists: VectorValuedHistogramNormalizer
lists: Faceted Search Based Ontology Visualizer
lists: Morphometry BIRN
lists: Colin 3T/7T High-resolution Atlas
lists: CMFreg
lists: BrainFX
lists: dinifti
lists: Center for Computational Biology at UCLA
lists: Convert MNI coordinates to or from XYZ
lists: Licensing issues in software and data
lists: Local Binary Pattern Analysis Tools for MR Brain Images
lists: MIView
lists: uManager
lists: Penn Hippocampus Atlas
lists: RapidArt
lists: Scribe
lists: ShapeWorks
lists: Vervet Probabilistic Atlas
lists: Talairach Daemon
lists: ADHD-200 Preprocessed Data
lists: LORIS - Longitudinal Online Research and Imaging System
lists: NVM
lists: Maps4Mipav (Exploratory JIST)
lists: Autism Tissue Program
lists: MEG Tools
lists: PyNIfTI
lists: LONI Visualization Tool
lists: Mind Research Network - COINS
lists: OpenElectrophy
lists: CIFTI Connectivity File Format
lists: 3DSlicerLupusLesionModule
lists: BrainNetworkConstructionAnalysisPlatform
lists: COMPARE
lists: Data Format Tools
lists: GesTr
lists: I/OWA
lists: MINC Example files
lists: cbiNifti: Matlab/Octave Nifti library
lists: BRAINSCut
lists: C-PAC
lists: Connectir
lists: DicomBrowser
lists: Hitachi Optical Topography System
lists: Net Station API
lists: imcalc: SPM batch image calculator
lists: BRAINSCortex
lists: Insight Segmentation and Registration Toolkit
lists: LONI Debabeler
lists: LONI Pipeline Processing Environment
lists: NiLearn
lists: MRI Studio
lists: BraVa
lists: Brede Wiki
lists: Center for Functional Neuroimaging Technologies
lists: Philips Users Community
lists: medInria
lists: Beijing: Eyes Open Eyes Closed Study
lists: vIST/e
lists: Camino
lists: Diffusion Tensor Imaging ToolKit
lists: TORTOISE
lists: NIDAG: Neuroimaging Data Access Group
lists: MRI CVPR
lists: vuTools
lists: Medical Image Processing and Visualization in Virtual Environments
lists: Brainstorm
lists: Atlas3D
lists: FMRISTAT - A general statistical analysis for fMRI data
lists: FreeSurfer
lists: Rosetta Bit
lists: Laboratory of Neuro Imaging
lists: Group ICA of fMRI Toolbox
lists: Hierarchical Attribute Matching Mechanism for Elastic Registration
lists: Internet Brain Segmentation Repository
lists: Neural ElectroMagnetic Ontologies (NEMO) Project
lists: Wavelet-based Image Fusion
lists: ITK-SNAP
lists: Internet Brain Volume Database
lists: Statistical non-Parametric Mapping
lists: VoxBo
lists: NITRC Computational Environment
lists: Spatially Constrained Parcellation
lists: Cluster reporter
lists: Cluster Extent Correction
lists: 4D Atlases Construction
lists: CIGAL
lists: CleanLine
lists: Computational Morphometry Toolkit
lists: Cognitive Paradigm Ontology
lists: aBEAT
lists: MR Connectome Automated Pipeline
lists: International Neuroinformatics Coordinating Facility
lists: Functional Regression Analysis of DTI Tract Statistics
lists: MCIC
lists: MGDM: Multi Geometric Deformable Model
lists: MIAS Registration Toolkit
lists: Medical Image Visualization and Analysis
lists: Microstructural correlation toolbox
lists: MisterI
lists: MriWatcher
lists: Multiple Correlation Function Tool
lists: NITRC Community Conferences Workshops and Meetings
lists: BRAINSFit
lists: INCF Software Center
lists: BrainVision Analyzer
lists: COGNISION
lists: DPARSF
lists: GLIRT
lists: MINC
lists: Group Level Imputation of Statistic Maps
lists: MRIcron
lists: Inter-Group Registration Toolbox
lists: MCML and CONV
lists: MEGSIM
lists: MIRIAD
lists: MRI Defacer
lists: MS lesion segmentation challenge 2008
lists: Measure Projection Toolbox
lists: Mindboggle
lists: Mindboggle-101 atlases
lists: ModelGUI
lists: Multi-Modal MRI Reproducibility Resource
lists: MultiTracer
lists: Multicomponent T2 estimation with stimulated echo correction
lists: NCANDA: Data Integration Component
lists: NFT
lists: Net Station EEG Software
lists: Network Based Statistic Toolbox
lists: NeuroScope
lists: Numerical Fibre Generator
lists: PST MRI Simulator
lists: cortex
lists: iBEAT
lists: M3
lists: Group ICA Of EEG Toolbox
lists: 4D-PARSeR Pathological Anatomy Regression via Segmentation and Registration
lists: Automatic Segmentation Tool Adapter
lists: DTI-TEMPLATE-RHESUS-MACAQUES
lists: LONI Provenance Editor
lists: MNI N3
lists: MRI Digital Projection System
lists: NIDB - Neuroinformatics Database
lists: NIPY
lists: NIRAL Utilities
lists: NIRx NIRS Neuroimaging
lists: NIRx2nirs: A NIRx to .nirs data converter
lists: NITRC Enhanced Services
lists: NITRC GForge Extensions
lists: NPTK
lists: NeuroImaging Analysis Kit (NIAK)
lists: NiBabel
lists: NiftyRec
lists: Nipype
lists: Nirfast
lists: Nitime
lists: Non-Rigid Image Registration Evaluation Project
lists: Normative Independent Component Analysis
lists: OEI fMRI compatible olfactometer
lists: ORS Visual SI
lists: OpenMEEG
lists: PANDA
lists: PESTICA fMRI Physio Detection/Correction
lists: PHYCAA+: adaptive physiological noise correction for BOLD fMRI
lists: ParaView
lists: Parkinson’s Disease Biomarkers Program Data Management Resource (PDBP DMR)
lists: Presentation
lists: PySurfer
lists: Pythagorean Displacement and Motion Regressors
lists: Quantitative Diffusion Tools
lists: R-package for adaptive DWI analysis
lists: R-package for adaptive fMRI analysis
lists: REX
lists: RFT FDR
lists: ROBEX
lists: RT Image
lists: Resource Ontology Discussion Group
lists: Rodent Brain Extraction Tool
lists: Rodent Cortical Thickness Analysis
lists: S-rep Fitting Statistics and Segmentation
lists: SCIRun
lists: SCRalyze
lists: SOCK
lists: SPHARM-MAT
lists: SPHARM-PDM Toolbox
lists: SRI24 Atlas: Normal Adult Brain Anatomy
lists: Seg3D
lists: ShapeComplexAtlas
lists: Signed Differential Mapping
lists: Sleuth
lists: Slice:Drop
lists: Slicer3 Example Modules
lists: Source Information Flow Toolbox
lists: Spanish Resting State Network
lists: Spatial Analysis 3D
lists: Stereoscopic Atlas of Intrinsic Brain Networks
lists: UNC Infant 0-1-2 Atlases
lists: UNC Primate Brain Atlas
lists: XCEDE Schema
lists: peak nii
lists: pydicom
lists: pyxnat
lists: scikit-learn
lists: shapeAnalysisMANCOVA - SPHARM tools
lists: VMTK in 3D Slicer
lists: 3D Interactive Chemical Shift Imaging
lists: BRAINSSurfaceStats
lists: Brain lesion segmentation tool using SVM
lists: Diffusion Tractography with Kalman Filter
lists: Fast Nonlocal Means for MRI denoising
lists: Monte Carlo Simulation Software: tMCimg
lists: Web Interfaces for Multiscale Images
lists: STAPLE
lists: Segmentation Validation Engine
lists: Spatial Statistical Parametric Mapping
lists: SpineSegmentation module for 3DSlicer
lists: Stochastic Tractography System
lists: Subject Library
lists: TAPIR
lists: TARQUIN
lists: Template Image Processing Library
lists: TetraMetrix
lists: TractoR: Tractography with R
lists: Triangle BioSystems
lists: TumorSim
lists: TurtleSeg
lists: UNC Human Brain Atlas
lists: VR Worlds 2
lists: Vaa3D
lists: ValMap: simple statistical mapping tool
lists: WFU Biological Parametric Mapping Toolbox
lists: WFU Pipeline
lists: Working Memory Trainer
lists: vis: SPM Visualized Statistics toolbox
lists: Synchronized Histological Image Viewing Architecture
lists: LONI ShapeViewer
lists: LONI ShapeTools
lists: FFT Library
lists: Automated recognition of brain region mentions in neuroscience literature.
lists: NUTMEG
lists: Cognitive Atlas
lists: Mouse BIRN Atlasing Toolkit
lists: Temporal-Lobe: Hippocampal - Parahippocampal Neuroanatomy of the Rat
lists: FSL
lists: LEAD-DBS
lists: Brainscape
lists: EONS
lists: BioImage Suite
lists: ADNI - Alzheimer's Disease Neuroimaging Initiative
lists: MindSeer
lists: XNAT - The Extensible Neuroimaging Archive Toolkit
lists: brainmap.org
lists: ImageJ
lists: Neuroimaging Informatics Technology Initiative
lists: IMOD
lists: Statistics Online Computational Resource
lists: signalml.org
lists: Mouse Biomedical Informatics Research Network
lists: NIH MRI Study of Normal Brain Development
lists: MGH-USC Human Connectome Project
lists: Fusion ICA Toolbox
lists: Corpus Callosum Thickness Profile Analysis Pipeline
lists: ABIDE
lists: Mouse Connectome Project
lists: NITRC-IR
lists: Open Connectome Project
lists: neurodebian
lists: NIMH Data Archive
lists: ANTS - Advanced Normalization ToolS
lists: XNAT Extras
lists: TrackVis
lists: Brain Connectivity Toolbox
lists: FieldTrip
lists: LONI Inspector
lists: BrainLiner
lists: OpenNeuro
lists: Biomedical Informatics Research Network
lists: McConnell Brain Imaging Center MNI Macaque Atlas
lists: SINOMO
lists: DONE: Detection of Outlier NEurons
lists: Neuro Bureau
lists: ADHD-200 Sample
lists: 1000 Functional Connectomes Project
lists: PubBrain
lists: CBRAIN
lists: ENIGMA: Enhancing Neuro Imaging Genetics Through Meta-Analysis
lists: Bisque
lists: 3D Slicer
lists: Internet Analysis Tools Registry
lists: Neuromorphometrics
lists: Analysis of Functional NeuroImages
lists: Automated Image Registration
lists: BASH4RfMRI
lists: MNE software
lists: Object-Oriented Development Interface for NMR
lists: NYU CSC TestRetest
lists: Optseq - fMRI Event Scheduler
lists: TOADS-CRUISE Brain Segmentation Tools
lists: MouseTracker
lists: Hammer And WML Modules for 3D Slicer
lists: ABC (Atlas Based Classification)
lists: Allen Brain Atlas API
lists: Viking Viewer for Connectomics
lists: ARCTIC
lists: ArtRepair for robust fMRI
lists: Automatic Registration Toolbox
lists: Artifact Detection Tools
lists: Segmentation of Hippocampus Subfields
lists: ASL data processing tool box
lists: Bioelectromagnetism Matlab Toolbox
lists: PyMVPA
lists: Human Imaging Database
lists: BrainImage Software
lists: Brede Toolbox
lists: Computerized Anatomical Reconstruction and Editing Toolkit
lists: BrainColor: Collaborative Open Labeling Online Resource
lists: Registry Builder Data Harmonization and Aggregation Tool
lists: PsychoPy
lists: NiftySim
lists: NiftyReg
lists: Neurobiological Image Management System
lists: BRAINSTools
lists: MeshValmet: Validation Metric for Meshes
lists: BrainSuite
lists: DW-MRI Random Walk Simulator
lists: Web Game for Collaborative Labeling
lists: BrainVoyager Brain Tutor
lists: POLGUI - Matlab Polhemus Interface
lists: BrainVoyager Brain Viewer
lists: NeuroPub Visualizer
lists: NODDI Matlab Toolbox
lists: MITK Diffusion
lists: Federal Interagency Traumatic Brain Injury Research Informatics System
lists: BrainMaps.org
lists: PRoNTo
lists: Scalable Brain Atlas
lists: NIH Human Connectome Project
lists: Mesh-based Monte Carlo (MMC)
lists: Matlab Neuroshare Library
lists: MRtrix
lists: MABMIS: Multi-Atlas Based Multi-Image Segmentation
lists: Monte Carlo eXtreme
lists: Whole Brain Catalog
lists: BCILAB
lists: ABSORB: Atlas Building by Self-Organized Registration and Bundling
lists: VAMCA
lists: SPM
lists: Low Resolution Electromagnetic Tomography
lists: SurfStat
lists: Cambridge Brain Activation
lists: CLEAVE
lists: CoCoMac
lists: fMRI Data Center
lists: Function BIRN
lists: EEGLAB
lists: BrainVISA / Anatomist
lists: MIPAV: Medical Image Processing and Visualization
lists: NeuroLens
lists: WFU PickAtlas
lists: Open Access Series of Imaging Studies
lists: BioSig: An Imaging Bioinformatics System for Phenotypic Analysis
lists: xjView: A Viewing Program For SPM
lists: Human Connectome Coordination Facility
lists: ASL spm8
lists: Integrated Manually Extracted Annotation
lists: JIST: Java Image Science Toolkit
lists: Functional Analysis of Diffusion Tensor
lists: AHEAD
lists: ANTsR
lists: 3DBar
lists: Cancer Imaging Archive (TCIA)
lists: Pediatric Imaging Neurocognition and Genetics
lists: Atlasing of the basal ganglia
lists: cmrep
lists: 3D DTI Atlas of the Rat Brain In Postnatal Day 5 14 and Adulthood
lists: AutoSeg
lists: BXH/XCEDE Tools
lists: Baby Brain Toolkit
lists: Best Practices for Software Development
lists: Brain Catalogue
lists: Draw3D and Meshinator
lists: Brain Segmentation Testing Protocol
lists: BrainNet Viewer
lists: BrainSolution
lists: Brainvox
lists: C8: Corpus Callosum Computations
lists: CAMINO-TRACKVIS
lists: CANDI Share: Schizophrenia Bulletin 2008
lists: CBS High-Res Brain Processing Tools
lists: CCSeg - Corpus Callosum Segmentation
lists: Cerebral Blood Flow Database and Analysis Pipeline
lists: Create DWI Atlas
lists: DFBIdb
lists: DIAMOND
lists: DICOM UploadGUI
lists: DOTS WM tract segmentation
lists: DTI Fiber Tract Statistics
lists: DW-MRI registration in FSL
lists: DbGaP Cleaner
lists: DentalTools
lists: Diffusion MRI - In-vivo and Phantom Data
lists: Diffusion MRI at DKFZ Heidelberg
lists: Diffusion Warp
lists: Disease State Prediction
lists: EEG human categorization data
lists: Epsilon Radial Networks
lists: FBIRN Image Processing Scripts
lists: FSL extensions
lists: False Discovery Rate Weighted
lists: Fiber Tracking Tool
lists: Fiber-tracking based on Finsler distance
lists: FiberViewerLight
lists: Finsler tractography module for Slicer
lists: Fluid Registration and Atlas Toolkit
lists: Framework for Open Programmatic Access
lists: Functional Connectivity Community
lists: Functional ROI Atlas
lists: Functional and Structural Neuroimaging Journals Listing
lists: GAMBIT
lists: GAMMA
lists: BRAINSMush
lists: GPU based affine registration
lists: GRETNA
lists: Generalized Covariance Analysis
lists: Generalized PPI Toolbox
lists: Group Information Guided ICA
lists: Groupwise Image Registration Toolbox
lists: HD Neuro-Informatics
lists: Hitachi2nirs
lists: IDeA Lab brain image processing suite
lists: INCF Neuroimaging Data Sharing
lists: INIA19 Primate Brain Atlas
lists: JHU Proj. in Applied Medical Imaging
lists: JIST Resources for Algorithm Development
lists: BRAINSROIAuto
lists: Joint Anisotropic LMMSE Filter for Stationary Rician noise removal in DWI
lists: Landman NeuroImaging Tools
lists: Local Label Learning Segmentation
lists: MASI Label Fusion
lists: MASIMatlab
lists: MATLAB Tutorial on Diffusion Tensor MRI
lists: Multi-Echo Independent Component Regression Group-Level Connectivity Dataset
lists: Multi-fiber Reconstruction from DW-MRI
lists: NITRC Books
lists: Network Modification Tool Lite
lists: Non-rigid groupwise registration method
lists: Rockland Download Link Script
lists: Subject Order-Independent Group ICA
lists: Task Independent Fluctuations Discussion
lists: UNC Human DTI Brain Atlas
lists: BRAINSTestData
lists: cPPI Toolbox for fMRI
lists: fMRI Classification in R
lists: fMRI-CPCA
lists: fNIRS Data Analysis Environment
lists: factory t1 dti
lists: BRAINSDemonWarp
lists: AMILab
lists: ADJUST
lists: ALVIN
lists: Age Related Atrophy Dataset
lists: B0 and eddy current correction for DTI
lists: BESA
lists: BSMac
lists: BVQXtools
lists: BioMesh3D
lists: BrainBrowser
lists: BrainGraph Editor
lists: BrainMagix SPM Viewer
lists: BrainMask Volume Processing Tool
lists: Brainsight
lists: Brainwaver
lists: CANDI Neuroimaging Access Point
lists: CBFBIRN
lists: CDF-HC PointSetReg
lists: GIMIAS
lists: CURRY
lists: CalaTK
lists: CoCoMac-Paxinos3D viewer
lists: INVIZIAN
lists: CONN
lists: Connectome File Format
lists: Connectome Viewer
lists: Cytoseg
lists: DICCCOL predictor
lists: DRAMMS
lists: DSI Studio
lists: Level-set Segmentation for Slicer3
lists: DTI BrainImageScope
lists: DTI-Reg
lists: DTIProcess ToolKit
lists: DWI/DTI Quality Control Tool: DTIPrep
lists: Diffusional Kurtosis Estimator
lists: Distributome
lists: ImageVis3D
lists: E-Prime
lists: E-Prime Extensions for fMRI
lists: EEGVIS
lists: EEProbe
lists: EMSE Suite
lists: LONI Brain Parser
lists: EPILAB
lists: ERPLAB
lists: FIV
lists: FMRIpower
lists: Fiber Optic Button Response System
lists: Free-D
lists: GIFTI
lists: GMAC: A Matlab toolbox for spectral Granger causality analysis of fMRI data
lists: HAMMER Suite
lists: HERMES
lists: HI-SPEED Software Packets
lists: Homer2
lists: IIT Human Brain Atlas
lists: JIP Analysis Toolkit
lists: Jim
lists: LDDMM
lists: LIBEEP
lists: LIMO EEG
lists: LONI De-identification Debablet
lists: Waxholm Space
lists: Lipsia
lists: Lumina LP- 400 Response System
lists: MRI Dataset for Hippocampus Segmentation
lists: MaCH-Admix
lists: Mach2dat
lists: Mag Design and Engineering
lists: MagPro Magnetic Stimulator
lists: SR Research EyeLink Eye Trackers
lists: Mango
lists: Manually Labeled MRI Brain Scan Database
lists: MarsBaR region of interest toolbox for SPM
lists: MazeSuite
lists: MoTrak Head Motion Tracking System
lists: NCIGT Fast Imaging Library
lists: NeuroWeb - NeuroImaging Database
lists: Neuroimaging Made Easy Blog
lists: Neurophysiological Biomarker Toolbox
lists: SVV
lists: Slicer3 Module Rician noise filter
lists: UNC/Utah NAMIC DTI Fiber Analysis Framework
lists: caGWAS
lists: eConnectome
lists: elastix
lists: fMRI Artefact rejection and Sleep Scoring Toolbox
lists: MACH
lists: fMRI Grocer
lists: fNIR Devices
lists: fanDTasia Java Applet: DT-MRI Processing
lists: g.BSanalyze
lists: iTools
lists: iView X MRI-LR - Eye Tracking for fMRI
lists: map3d
lists: NICE-SIGN
lists: NIRS-SPM
lists: NITRC Community
lists: NordicNeuroLab
lists: PICSL Multi-Atlas Segmentation Tool
lists: Paradigm
lists: Pipeline Neuroimaging VirtualEnvironment
lists: Pipeline System for Octave and Matlab
lists: ProbabilisticBiasCorrection
lists: Program for optimal design of blocked fMRI experiments
lists: QCQP
lists: REST: a toolkit for resting-state fMRI
lists: Robust Biological Parametric Mapping
lists: SPM SS - fMRI functional localizers
lists: Solar Eclipse Imaging Genetics tools
lists: VIEWPixx /3D
lists: resting-state pediatric imaging template
lists: DATAPixx
lists: GTRACT
lists: Wisconsin White Matter Hyperintensities Segmentation Toolbox
lists: COBRE
lists: AngioCalc Cerebral Aneurysm Calculator
lists: USC Multimodal Connectivity Database
lists: BRAINSConstellationDetector
lists: ASA - Advanced Source Analysis
lists: BRAINSTracer
lists: EYE-EEG (combined eye-tracking & EEG)
lists: BrainVoyager
lists: Mean Machine
lists: ERP PCA Toolkit
lists: LiverSegm
lists: GSA-SNP
lists: FastICA
lists: DTI Atlas Builder
lists: Neuroimaging in Python
lists: Brain Decoder Toolbox
lists: iso2mesh
lists: CUDA-SPHERE-FWD-MEEG
lists: BrainCSI
lists: BrainVisa Morphology extensions
lists: VIEWPixx
lists: PROPixx
lists: GenGen
lists: MACH 1.0
lists: PennCNV
lists: SumsDB
lists: Integrated Software
lists: NeuroLex
lists: Parkinson's Progression Markers Initiative
lists: NeuroSynth
lists: Textpresso
lists: ANNOVAR
lists: Graphtools
lists: Grantees Meeting for NITRC
lists: FP-CIT SPECT brain template in MNI space
lists: Brain Computer Interface 2000 Software Package
lists: BEAST
lists: Brian Simulator
lists: Connectome Workbench
lists: ConnectomeDB
lists: DIAN - Dominantly Inherited Alzheimer Network
lists: NKI-RS Enhanced Sample
lists: EPILEPSIE database
lists: GEneral NEural SImulation System: The Neurospaces Project
lists: Hippocampome.org
lists: Kitware
lists: Kymata Atlas
lists: L-Measure
lists: MDR
lists: neuroConstruct
lists: Neurolucida
lists: NeuroMorpho.Org
lists: NEURON
lists: NeuronJ: An ImageJ Plugin for Neurite Tracing and Quantification
lists: NeuroVault
lists: National Institute on Aging Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS)
lists: NINDS Repository
lists: NKI/Rockland Sample
lists: ODIN
lists: OBART
lists: Open Science Framework
lists: PLINK
lists: Stereo Investigator
lists: studyforrest.org
lists: Virtual brain
lists: TREES toolbox
lists: APERTURE
lists: 3dsvm
lists: 7T Structural MRI scans ATAG
lists: Atlases of amygdala and hippocampus for pediatric populations
lists: BetA-Series COrrelation
lists: bic-mni-models
lists: BiofilmQuant
lists: Biomag Discussion Group on Yahoo
lists: Brain Entropy in space and time (BEst)
lists: Brainnetome Atlas Viewer
lists: Brainnetome fMRI toolkit
lists: BROCCOLI
lists: C-MIND Database
lists: CARLsim: a GPU-accelerated SNN Simulator
lists: Clinical Toolbox for SPM
lists: CMIND PY
lists: COST
lists: dcm2nii
lists: DICOMConvert
lists: Displacement Field Viewer
lists: DTI denoising
lists: Efficient Longitudinal Upload of Depression in the Elderly (ELUDE)
lists: Efficient Permutation Testing
lists: DTI-TK
lists: ERPwavelab
lists: ExPosition Packages
lists: Fast T2 relaxation data analysis with stimulated echo correction and non-local spatial regularisation
lists: Forward: Accurate finite element electromagnetic head models
lists: freesurfR
lists: Functional Connectivity Analysis Tool for near-infrared spectroscopy data
lists: GazeReader
lists: gCCA
lists: Generation R Pediatric MRI Resources
lists: GIMME
lists: GLMdenoise: a fast, automated technique for denoising task-based fMRI data
lists: GraphVar: A toolbox for comprehensive graph analyses of functional brain connectivity
lists: HAMMER: Deformable Registration
lists: HBM Hackathon
lists: HDBIG
lists: High-quality diffusion-weighted imaging of Parkinsons disease
lists: MGA - Multimodal Glioma Analysis
lists: Image Synthesis Tools
lists: Imeka Tractography Service
lists: International Imaging Genetics Conference
lists: Intrinsic Unscented Kalman Filter (IUKF) Tractography Software v1.0
lists: Iterative dual-regression with sparse prior
lists: Joint Anisotropic LMMSE Filter for Stationary Rician noise removal in DWI
lists: KWScene: MRML-based Atlas and Scene Builder/Reader/Writer
lists: L-Neuron
lists: Laplace Beltrami Filter on QuadEdge Meshes
lists: libSBML
lists: Lightweight Data Pipeline
lists: Longitudinal MS Lesion Imaging Archive
lists: MARS (Multi-Atlas Robust Segmentation)
lists: minc-toolkit
lists: minc-toolkit-testsuite
lists: MISST - Microstructure Imaging Sequence Simulation ToolBox
lists: MRI Neuroanatomy Labeling Services
lists: MRIcroS
lists: Multivariate General Linear Models (MGLM) on Riemannian Manifolds
lists: Neoseg
lists: NeoSegPipeline
lists: NeuriteTracer
lists: NeuroElf
lists: Neuron-C
lists: NIH Pediatric MRI Data Repository
lists: NIH-CIDI Lung Segmentation Tool
lists: NiiStat
lists: Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
lists: Notion ResearchPACS
lists: NTU-DSI-122: a DSI template in ICBM-152 space
lists: OpenViBE
lists: OpenWalnut
lists: Orientation Distribution Function in Constant Solid Angle (CSA-ODF)
lists: Parkinsons Disease Discovery Database
lists: Prediction and Diagnosis for Depression and Schizophrenia
lists: Preprocessed Connectomes Project
lists: Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data
lists: Ruby NIfTI
lists: SCORE
lists: SFMProject
lists: ShapePopulationViewer
lists: Simulated DW-MRI Brain Data Sets for Quantitative Evaluation of Estimated Fiber Orientations
lists: SPIKECOR: fMRI tool for automated correction of head motion spikes
lists: Spinal Cord Toolbox
lists: Stark Cross-Sectional Aging
lists: Brain Coactivation Map
lists: Multiscale Object Orientation Simulation Environment
lists: Striatal Subregional VOImap
lists: Topographica
lists: Turbo-BrainVoyager
lists: CRL Unbiased and Deformable Spatiotemporal Atlas of the Fetal Brain
lists: UNC-Wisconsin Neurodevelopment Rhesus MRI Database
lists: Virtual Electrode Recording Tool for EXtracellular potentials (VERTEX)
lists: VMTK in 3D Slicer
lists: Wisconsin Cortical Thickness Analysis (CTA) Toolbox
lists: XFSL: An FSL toolbox
lists: XNBC
lists: YMDTI: Diffusion Tensor Images of Healthy Young Males
lists: BraTumIA (Brain Tumor Image Analysis)
lists: CAWorks
lists: Functional Real-time Interactive Endogenous Neuromodulation and Decoding (FRIEND)
lists: Graph Theory GLM (GTG) MATLAB Toolbox
lists: Functional Mixed Processes Models
lists: Papaya
lists: Parallel Stochastic Ion Channel Simulator
lists: Advanced Connectivity Analysis (ACA)
lists: International Imaging Genetics Conference
lists: Analyze Software System
lists: Optseq
lists: ENIGMA-DTI Pipeline
lists: Umea Brain Arteries
lists: MetaSearch
lists: BrainBox
lists: BluePyOpt
lists: MultiXplore
lists: Automatic Tractography-based Parcellation Pipeline
lists: Epilepsy T1 and Hippocampal Segmentation Datasets
lists: Mixed Effect Model of Genetic-Set and Environment Interaction
lists: masked ICA (mICA) Toolbox
lists: Altered States Database
lists: User Friendly Functional Connectivity - UF²C
lists: Intra- and inter-scanner reliability of RS-fMRI BOLD and ASL with eyes closed vs. eyes open
lists: Region to Region
lists: Waxholm Space Atlas of the Sprague Dawley Rat Brain
lists: Nutil - Neuroimaging utilities
lists: MeshView
lists: vini: A viewer for fMRI data
lists: brainGraph
lists: Diffusion Toolkit
lists: Neurodocker
lists: HeuDiConv: a heuristic-centric DICOM converter
lists: Knowing what you know (kwyk) - Bayesian Brain Parcellation
lists: Rhesus Macaque Brain Atlases
lists: MIITRA atlas
lists: MonkeyCBP
lists: ReproNim/containers
lists: ReproMan
lists: ABCD-ReproNim Course
lists: Ventricular Morphometry Analysis System
lists: ONPRC18 Multimodal MRI Atlas
lists: volBrain
lists: Waxholm Space
is affiliated with: Manual Align RTS2000
is related to: University of California; San Diego;National Center for Microscopy and Imaging Research - NCMIR
has parent organization: Harvard University; Cambridge; United States
has parent organization: NIH Blueprint for Neuroscience Research
is parent organization of: Licensing issues in software and data
is parent organization of: NITRC Enhanced Services
is parent organization of: Resource Ontology Discussion Group
is parent organization of: NITRC-IR
is parent organization of: 1000 Functional Connectomes Project
is parent organization of: NYU CSC TestRetest
is parent organization of: NITRC Books
is parent organization of: NITRC Community
is parent organization of: ABIDE
is parent organization of: COBRE
is parent organization of: Group Sparse Canonical Correlation Analysis
is parent organization of: Challenge Competitions Collection
is parent organization of: 1000 Functional Connectomes Project
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NIH Blueprint for Neuroscience Research , NIMH , NIDA , NIBIB , NINDS |
PMID:26044860
PMID:18999128 |
Free, Freely available, Registration suggested |
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nif-0000-00202 |
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SCR_003430 |
Neuroimaging Informatics Tools and Resources Clearinghouse, , NeuroImaging Tools and Resources Collaboratory, Neuroimaging Informatics Tools Resources Clearinghouse, NITRC - Neuroimaging Informatics Tools and Resources Clearinghouse, NITRC - Neuroimaging Informatics Tools Resources Clearinghouse |
2024-07-03 10:32:42 |
277 |
Genes Cognition and Psychosis Program
Resource Report
Resource Website
1+ mentions
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Genes Cognition and Psychosis Program (RRID:SCR_006292)
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GCAP
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data or information resource, disease-related portal, topical portal, portal
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Schizophrenia related portal that aims to solve the mystery of genetic predisposition to psychosis, develop new methods for early diagnosis and prevention, and discover new treatments that will cure people suffering from it. Our objectives are to fully characterize: # neurobiological mechanisms related to susceptibility genes for schizophrenia and related clinical disorders; # genetic variation in aspects of cognition and emotionality associated with schizophrenia; and # small molecular targets for novel therapies. A unique feature of this Program is that its diverse scientific resources will be focused on a highly specific scientific agenda, that is to acquire the critical biological information about the susceptibility genes associated with schizophrenia and related illnesses. Our mission and goal, to understand the basic mechanisms of serious mental illness, has again guided us into new areas of research and to new insights. We have found evidence of new genes implicated in the cause of schizophrenia and involved in brain functions related to cognition and emotion and we have begun to explore how genes interact with each other and with the environment to individualize risk for these conditions. We are working now with over 20 genes related to schizophrenia. One of the key developments in our research over the past year has been the emergence of some targets for the development of novel therapeutics. We have discovered a new schizophrenia susceptibility gene, KCNH2, which represents the first clear target for the development of novel treatments. Just in this past year, for example, we published the first extensive statistical analysis of how schizophrenia genes may vary in their risk effects based on different genetic background (Nicodemus et al Hum Gen 2006), the first studies of schizophrenia genes interacting in effecting gene expression in brain (Lipska et al Hum Mol Genetics 2006a, Lipska et al Hum Mol Gen 2006 b); the first evidence that the mechanism of genetic association of NRG1 with schizophrenia involves a novel isoform of the gene in human brain (Law et al PNAS 2006), and the first evidence that MAOA may be linked to mood and impulse control because it effects critical mood regulatory neural networks (Meyer-Lindenberg et al PNAS 2006).
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gene, genetic variation, cognition, emotion, therapeutics, treatment, drug development, brain function, psychosis, drug
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is related to: NIMH Intramural Research Program Clinical Brain Disorders Branch
has parent organization: NIMH Division of Intramural Research Programs
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Schizophrenia, Mental illness, Psychiatric disorder |
NIMH |
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nlx_151948 |
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SCR_006292 |
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2024-07-03 10:34:57 |
1 |
NIMH DIRP Scientific and Statistical Computing Core
Resource Report
Resource Website
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NIMH DIRP Scientific and Statistical Computing Core (RRID:SCR_006958)
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SSCC, NIMH DIRP SSCC
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data or information resource, topical portal, portal
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Scientific and Statistical Computing Core of the NIMH Intramural Research Program supporting functional neuroimaging research at the NIH. This includes development of new data analysis techniques, their implementation in the AFNI software, advising researchers on the analysis methods, and instructing them in the use of software tools. Support methods: A. Provision of software for analysis for FMRI data (AFNI package: http://afni.nimh.nih.gov) * AFNI has been developed for the last 10 years by Dr Cox, et al. (6 years in Milwaukee, 4 years at NIMH) * Formal and informal instruction in the use of AFNI, including outlines of the statistical methods used in the programs * Installation of AFNI on NIH computers (Mac OS X, Unix, Linux) approximately 120 NIH systems have used AFNI in the last month (80 NIMH, 20 NINDS, 20 other) * Realtime monitoring of FMRI data at scanners * Continuing development of new modules for AFNI to meet needs of NIH researchers B. Consulting with NIH researchers about FMRI data analysis issues, concerns, and methods
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neuroimaging, functional neuroimaging, research, data analysis, analysis, software, tool, fmri, statistics, computing
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has parent organization: NIMH Division of Intramural Research Programs
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NIMH |
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nlx_144305 |
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SCR_006958 |
NIMH DIRP Scientific Statistical Computing Core, Scientific and Statistical Computing Core, DIRP Scientific and Statistical Computing Core, Scientific Statistical Computing Core |
2024-07-03 10:35:32 |
0 |
RDoCdb
Resource Report
Resource Website
1+ mentions
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RDoCdb (RRID:SCR_013796)
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RDoCdb
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data resource, information resource
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A database that houses human subjects data related to mental health research. Data from 691 subjects are shared in RDoCdb and data from 100,500 subjects are shared in the NIMH Data Archive. Users can plan for data submission, share data, query data, or share their results related to a publication or finding.
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database, human, mental health, research, data submission
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uses: NIMH Data Archive
is used by: National Database for Clinical Trials related to Mental Illness
is listed by: NIH Data Sharing Repositories
is related to: National Database for Clinical Trials related to Mental Illness
is related to: NIMH Data Archive
is related to: National Database for Clinical Trials related to Mental Illness
is related to: RDoC
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Public, Only for research, The community can contribute to this resource |
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SCR_013796 |
Research Domain Criteria Database |
2024-07-01 10:39:16 |
2 |
NIMH Intramural Research Program Clinical Brain Disorders Branch
Resource Report
Resource Website
10+ mentions
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NIMH Intramural Research Program Clinical Brain Disorders Branch (RRID:SCR_008728)
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CBDB
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data or information resource, topical portal, portal
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THIS RESOURCE IS NO LONGER IN SERVICE, documented on February 07, 2013. A multidisciplinary neuroscience laboratory in which basic and clinical scientists work side by side exploring neural mechanisms and models of mental and cognitive function and of neuropsychiatric illness. Experiments are performed at many levels of inquiry, from basic molecular biology of the gene to clinical examinations of patients. A major area of investigation of this laboratory is the genetic mechanisms implicated in the pathogenesis of schizophrenia and its treatment. The laboratory is organized as a multi-disciplinary team of investigators with a common mission: to identify and fully characterize basic genetic and neurobiological mechanisms of schizophrenia and related cognitive and emotional disorders. The various components of this effort are centered various different units or divisions represented by groups of investigators, at various levels of training and experience, working on related experiments. The Director of the Branch and of the Genes, Cognition and Psychosis Program (GCAP) is Daniel R. Weinberger, M.D. The CBDB is the principle research laboratory in the created (2003) Genes, Cognition, and Psychosis Program (GCAP) of the NIMH. After twelve years of residing on the pastoral grounds of St. Elizabeths Hospital, in Southeast Washington, CBDB moved back to the main NIH campus in Bethesda, Maryland in 1998. While the unique setting of St. Elizabeths is irreplaceable, we have occupied beautiful new laboratories and clinic spaces that were created for us, and we are in the mainstream of NIH life.
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mental function, cognitive function, gene, clinical, treatment, pathogen
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is related to: Genes Cognition and Psychosis Program
has parent organization: NIMH Division of Intramural Research Programs
is parent organization of: NIMH Brain Tissue Collection
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Schizophrenia, Neuropsychiatric illness, Cognitive disorder, Emotional disorder |
NIMH |
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THIS RESOURCE IS NO LONGER IN SERVICE |
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nlx_143685 |
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SCR_008728 |
NIMH Clinical Brain Disorders Branch, Clinical Brain Disorders Branch |
2024-07-03 10:37:12 |
12 |
HED Tags
Resource Report
Resource Website
1+ mentions
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HED Tags (RRID:SCR_014074)
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HED
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data or information resource, standard specification, narrative resource
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Strategy guide for HED Annotation. Framework for systematically describing laboratory and real world events.HED tags are comma separated path strings. Organized in forest of groups with roots Event, Item, Sensory presentation, Attribute, Action, Participant, Experiment context, and Paradigm. Used for preparing brain imaging data for automated analysis and meta analysis. Applied to brain imaging EEG, MEG, fNIRS, multimodal mobile brain or body imaging, ECG, EMG, GSR, or behavioral data. Part of Brain Imaging Data Structure standard for brain imaging.
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Data, structure, standard, EEG, brain, imaging, comma, separated, path, string, analysis, MEG, fNIRS, multimodal, ECG, EMG, GSR, behavioral
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is used by: NIMH Data Archive
is used by: HeadIT
is used by: OpenNeuro
has parent organization: University of California at San Diego; California; USA
is organization facet of: BRAIN Initiative
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Swartz Foundation , Army Research Laboratory Cooperative Agreement , NIMH , NINDS |
PMID:27799907 |
Free, Freely available |
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SCR_017630 |
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SCR_014074 |
Hierarchical Event Descriptor Tags, Hierarchical Event Descriptor, HED, HED tags |
2024-07-03 10:40:27 |
5 |
NIH Heal Project
Resource Report
Resource Website
1+ mentions
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NIH Heal Project (RRID:SCR_022808)
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data or information resource, funding resource, organization portal, portal
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Project to help to end opioid addiction. Addiction Long-term Initiative or NIH HEAL Initiative, to speed scientific solutions to stem national opioid public health crisis. Initiative is funding hundreds of projects nationwide. Researchers are taking variety of approaches to tackle opioid epidemic through
understanding, managing, and treating pain, and also through improving prevention and treatment for opioid misuse and addiction.
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Opioid addiction, end opioid addiction, national opioid public health crisis, prevention and treatment, opioid misuse and addiction,
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uses: NIMH Data Archive
uses: Data and Specimen Hub (NICHD DASH)
uses: National Addiction and HIV Data Archive Program (NAHDAP)
uses: NIDA Data Share
uses: The NINDS Human Cell and Data Repository (NHCDR)
uses: NIDDK Central Repository
uses: Microphysiology Systems Database
uses: Vivli
uses: FigShare
uses: Dryad Digital Repository
uses: Dataverse Network Project
uses: Mendeley Data
uses: NCBI database of Genotypes and Phenotypes (dbGap)
uses: Open Science Framework
uses: OpenNeuro
uses: Qualitative Data Repository
uses: Mouse Phenome Database (MPD)
uses: Mouse Genome Informatics (MGI)
uses: Zebrafish Information Network (ZFIN)
uses: Rat Genome Database (RGD)
uses: ZENODO
uses: Metabolomics Workbench
uses: PubMed Central
uses: Protocols.io
uses: SPARC Project
uses: GitHub
is related to: RE-JOIN HEAL Consortium
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Free, Freely available |
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SCR_022808 |
NIH HEAL Initiative, Addiction Long-term Initiative |
2024-07-03 10:46:39 |
5 |
scicrunch.org
