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PTBP1 enforces ATR-CHK1 signaling determining the potency of CDC7 inhibitors.

iScience | 2023

CDC7 kinase is crucial for DNA replication initiation and fork processing. CDC7 inhibition mildly activates the ATR pathway, which further limits origin firing; however, to date the relationship between CDC7 and ATR remains controversial. We show that CDC7 and ATR inhibitors are either synergistic or antagonistic depending on the degree of inhibition of each individual kinase. We find that Polypyrimidine Tract Binding Protein 1 (PTBP1) is important for ATR activity in response to CDC7 inhibition and genotoxic agents. Compromised PTBP1 expression makes cells defective in RPA recruitment, genomically unstable, and resistant to CDC7 inhibitors. PTBP1 deficiency affects the expression and splicing of many genes indicating a multifactorial impact on drug response. We find that an exon skipping event in RAD51AP1 contributes to checkpoint deficiency in PTBP1-deficient cells. These results identify PTBP1 as a key factor in replication stress response and define how ATR activity modulates the activity of CDC7 inhibitors.

Pubmed ID: 37378325 RIS Download

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This is a list of tools and resources that we have found mentioned in this publication.


HEK293T (tool)

RRID:CVCL_0063

Cell line HEK293T is a Transformed cell line with a species of origin Homo sapiens (Human)

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IRDye 800CW Goat anti-Rabbit IgG (antibody)

RRID:AB_621843

This polyclonal secondary targets IgG

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Rad51 (H-92) (antibody)

RRID:AB_2253533

This polyclonal targets RAD51

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Anti-RAD51AP1 polyclonal antibody (antibody)

RRID:AB_2681508

This polyclonal targets RAD51AP1

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hnRNP I (SH54) (antibody)

RRID:AB_783822

This monoclonal targets Human PTBP1

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Chk1 (G-4) (antibody)

RRID:AB_627257

This monoclonal targets Chk1 (G-4)

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Phospho-Chk1 (Ser345) (133D3) Rabbit mAb (antibody)

RRID:AB_331212

This monoclonal targets Chk1, phospho (Ser345)

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BrdU (antibody)

RRID:AB_10015219

This unknown targets BrdU

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ATR (phospho Thr1989) antibody (antibody)

RRID:AB_2687562

This polyclonal targets ATR (phospho Thr1989)

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53BP1 Antibody (antibody)

RRID:AB_10003037

This unknown targets 53BP1

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MCF-10A (cell line)

RRID:CVCL_0598

Cell line MCF-10A is a Spontaneously immortalized cell line with a species of origin Homo sapiens

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