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MPAPASS software enables stitched multiplex, multidimensional EV repertoire analysis and a standard framework for reporting bead-based assays.

Cell reports methods | 2022

Extracellular vesicles (EVs) of various types are released or shed from all cells. EVs carry proteins and contain additional protein and nucleic acid cargo that relates to their biogenesis and cell of origin. EV cargo in liquid biopsies is of widespread interest owing to its ability to provide a retrospective snapshot of cell state at the time of EV release. For the purposes of EV cargo analysis and repertoire profiling, multiplex assays are an essential tool in multiparametric analyte studies but are still being developed for high-parameter EV protein detection. Although bead-based EV multiplex analyses offer EV profiling capabilities with conventional flow cytometers, the utilization of EV multiplex assays has been limited by the lack of software analysis tools for such assays. To facilitate robust EV repertoire studies, we developed multiplex analysis post-acquisition analysis (MPAPASS) open-source software for stitched multiplex analysis, EV database-compatible reporting, and visualization of EV repertoires.

Pubmed ID: 35474866 RIS Download

Associated grants

  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM120272
  • Agency: NHLBI NIH HHS, United States
    Id: U01 HL126497
  • Agency: NCI NIH HHS, United States
    Id: R01 CA218500
  • Agency: NCATS NIH HHS, United States
    Id: UG3 TR002881
  • Agency: Intramural NIH HHS, United States
    Id: ZIA BC011503
  • Agency: Intramural NIH HHS, United States
    Id: ZIA BC011502
  • Agency: Intramural NIH HHS, United States
    Id: Z01 BC006161
  • Agency: NIDA NIH HHS, United States
    Id: U54 DA049098

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