Searching across hundreds of databases

Our searching services are busy right now. Your search will reload in five seconds.

X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Tracing of Afferent Connections in the Zebrafish Cerebellum Using Recombinant Rabies Virus.

Frontiers in neural circuits | 2019

The cerebellum is involved in some forms of motor coordination and learning, and in cognitive and emotional functions. To elucidate the functions of the cerebellum, it is important to unravel the detailed connections of the cerebellar neurons. Although the cerebellar neural circuit structure is generally conserved among vertebrates, it is not clear whether the cerebellum receives and processes the same or similar information in different vertebrate species. Here, we performed monosynaptic retrograde tracing with recombinant rabies viruses (RV) to identify the afferent connections of the zebrafish cerebellar neurons. We used a G-deleted RV that expressed GFP. The virus was also pseudotyped with EnvA, an envelope protein of avian sarcoma and leucosis virus (ALSV-A). For the specific infection of cerebellar neurons, we expressed the RV glycoprotein (G) gene and the envelope protein TVA, which is the receptor for EnvA, in Purkinje cells (PCs) or granule cells (GCs), using the promoter for aldolase Ca (aldoca) or cerebellin 12 (cbln12), respectively. When the virus infected PCs in the aldoca line, GFP was detected in the PCs' presynaptic neurons, including GCs and neurons in the inferior olivary nuclei (IOs), which send climbing fibers (CFs). These observations validated the RV tracing method in zebrafish. When the virus infected GCs in the cbln12 line, GFP was again detected in their presynaptic neurons, including neurons in the pretectal nuclei, the nucleus lateralis valvulae (NLV), the central gray (CG), the medial octavolateralis nucleus (MON), and the descending octaval nucleus (DON). GFP was not observed in these neurons when the virus infected PCs in the aldoca line. These precerebellar neurons generally agree with those reported for other teleost species and are at least partly conserved with those in mammals. Our results demonstrate that the RV system can be used for connectome analyses in zebrafish, and provide fundamental information about the cerebellar neural circuits, which will be valuable for elucidating the functions of cerebellar neural circuits in zebrafish.

Pubmed ID: 31068795 RIS Download

Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.

This is a list of tools and resources that we have found mentioned in this publication.


GenBank (tool)

RRID:SCR_002760

NIH genetic sequence database that provides annotated collection of all publicly available DNA sequences for almost 280 000 formally described species (Jan 2014) .These sequences are obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects, including whole-genome shotgun (WGS) and environmental sampling projects. Most submissions are made using web-based BankIt or standalone Sequin programs, and GenBank staff assigns accession numbers upon data receipt. It is part of International Nucleotide Sequence Database Collaboration and daily data exchange with European Nucleotide Archive (ENA) and DNA Data Bank of Japan (DDBJ) ensures worldwide coverage. GenBank is accessible through NCBI Entrez retrieval system, which integrates data from major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of GenBank database are available by FTP.

View all literature mentions

Adobe Photoshop (tool)

RRID:SCR_014199

Software for image processing, analysis, and editing. The software includes features such as touch capabilities, a customizable toolbar, 2D and 3D image merging, and Cloud access and options.

View all literature mentions

Anti-GFP (antibody)

RRID:AB_10013361

This monoclonal targets GFP

View all literature mentions

Goat Anti-Rat IgG (H+L) Highly Cross-Adsorbed Antibody, CF488A Conjugated (antibody)

RRID:AB_10557403

This unknown targets Goat Rat IgG (H+L) Highly Cross-Adsorbed CF488A

View all literature mentions

Goat Anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Antibody, CF568 Conjugated (antibody)

RRID:AB_10558012

This unknown targets Goat Rabbit IgG (H+L) Highly Cross-Adsorbed CF568

View all literature mentions

Goat Anti-Mouse IgG(H+L) Antibody, CF488A Conjugated (antibody)

RRID:AB_10853449

This unknown targets Goat Mouse IgG(H+L) CF488A

View all literature mentions

AB (organism)

RRID:ZIRC_ZL1

Danio rerio with name from ZIRC.

View all literature mentions

Anti-GFP (antibody)

RRID:AB_10013361

This monoclonal targets GFP

View all literature mentions

AB (organism)

RRID:ZIRC_ZL1

Danio rerio with name from ZIRC.

View all literature mentions

Goat Anti-Rat IgG (H+L) Highly Cross-Adsorbed Antibody, CF488A Conjugated (antibody)

RRID:AB_10557403

This unknown targets Goat Rat IgG (H+L) Highly Cross-Adsorbed CF488A

View all literature mentions

Goat Anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Antibody, CF568 Conjugated (antibody)

RRID:AB_10558012

This unknown targets Goat Rabbit IgG (H+L) Highly Cross-Adsorbed CF568

View all literature mentions

Goat Anti-Mouse IgG(H+L) Antibody, CF488A Conjugated (antibody)

RRID:AB_10853449

This unknown targets Goat Mouse IgG(H+L) CF488A

View all literature mentions