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Modifier Gene Candidates in Charcot-Marie-Tooth Disease Type 1A: A Case-Only Genome-Wide Association Study.

Journal of neuromuscular diseases | 2019

Charcot-Marie-Tooth disease type 1A (CMT1A) is caused by a uniform 1.5-Mb duplication on chromosome 17p, which includes the PMP22 gene. Patients often present the classic neuropathy phenotype, but also with high clinical variability.

Pubmed ID: 30958311 RIS Download

Research resources used in this publication

None found

Antibodies used in this publication

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Associated grants

  • Agency: NINDS NIH HHS, United States
    Id: R01 NS094388
  • Agency: NINDS NIH HHS, United States
    Id: U54 NS065712
  • Agency: NINDS NIH HHS, United States
    Id: R01 NS075764
  • Agency: NCATS NIH HHS, United States
    Id: KL2 TR002737
  • Agency: NINDS NIH HHS, United States
    Id: R01 NS043174
  • Agency: NICHD NIH HHS, United States
    Id: U54 HD090256
  • Agency: NINDS NIH HHS, United States
    Id: R01 NS075269

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This is a list of tools and resources that we have found mentioned in this publication.


PLINK (tool)

RRID:SCR_001757

Open source whole genome association analysis toolset, designed to perform range of basic, large scale analyses in computationally efficient manner. Used for analysis of genotype/phenotype data. Through integration with gPLINK and Haploview, there is some support for subsequent visualization, annotation and storage of results. PLINK 1.9 is improved and second generation of the software.

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LOCUSZOOM (tool)

RRID:SCR_009257

Software application designed to facilitate viewing of local association results together with useful information about a locus, such as the location and orientation of the genes it includes, linkage disequilibrium coefficients and local estimates of recombination rates. It was developed by popular demand, as a result of many questions we have had about How did you make the figures in your talk? or How did you make the figures for your GWAS paper? (entry from Genetic Analysis Software)

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Illumina (tool)

RRID:SCR_010233

American company incorporated that develops, manufactures and markets integrated systems for the analysis of genetic variation and biological function. Provides a line of products and services that serve the sequencing, genotyping and gene expression and proteomics markets. Its headquarters are located in San Diego, California.

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CNVPartition (tool)

RRID:SCR_010925

Software that estimates copy number and annotates regions with copy number variants(CNV).

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