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Qiita: rapid, web-enabled microbiome meta-analysis.

Nature methods | 2018

Multi-omic insights into microbiome function and composition typically advance one study at a time. However, in order for relationships across studies to be fully understood, data must be aggregated into meta-analyses. This makes it possible to generate new hypotheses by finding features that are reproducible across biospecimens and data layers. Qiita dramatically accelerates such integration tasks in a web-based microbiome-comparison platform, which we demonstrate with Human Microbiome Project and Integrative Human Microbiome Project (iHMP) data.

Pubmed ID: 30275573 RIS Download

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Associated grants

  • Agency: NIDDK NIH HHS, United States
    Id: P01 DK078669
  • Agency: NIMHD NIH HHS, United States
    Id: R01 MD011389
  • Agency: NHGRI NIH HHS, United States
    Id: R01 HG004872
  • Agency: NHLBI NIH HHS, United States
    Id: R01 HL140976
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062512

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ToRNADo (tool)

RRID:SCR_002706

A software application for animating and visualising RNA and other macromolecular structures. Users are able to use their intuition to interactively refold RNA structures and produce morphs from one structure to another. It allow researchers to explore and manipulate molecular structures Imported from BiositeMaps registry, to better understand structure:function relationships, folding pathways, and molecular motion.

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