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Gene interactions and structural brain change in early-onset Alzheimer's disease subjects using the pipeline environment.

Psychiatry investigation | 2015

This article investigates subjects aged 55 to 65 from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database to broaden our understanding of early-onset (EO) cognitive impairment using neuroimaging and genetics biomarkers.

Pubmed ID: 25670955 RIS Download

Research resources used in this publication

None found

Antibodies used in this publication

None found

Associated grants

  • Agency: NIA NIH HHS, United States
    Id: K01 AG030514
  • Agency: NIBIB NIH HHS, United States
    Id: P41 EB015922
  • Agency: NIA NIH HHS, United States
    Id: RF1 AG041915
  • Agency: NIBIB NIH HHS, United States
    Id: U54 EB020406
  • Agency: NIA NIH HHS, United States
    Id: P50 AG005142
  • Agency: NCRR NIH HHS, United States
    Id: R21 RR019771
  • Agency: NLM NIH HHS, United States
    Id: R01 LM005639
  • Agency: NIA NIH HHS, United States
    Id: U01 AG024904
  • Agency: NINR NIH HHS, United States
    Id: P20 NR015331
  • Agency: NIDDK NIH HHS, United States
    Id: P30 DK089503
  • Agency: NIBIB NIH HHS, United States
    Id: U54 EB020403
  • Agency: NCRR NIH HHS, United States
    Id: P41 RR013642
  • Agency: NCRR NIH HHS, United States
    Id: U54 RR021813
  • Agency: NCRR NIH HHS, United States
    Id: U24 RR021992
  • Agency: NINDS NIH HHS, United States
    Id: P50 NS091856
  • Agency: NIA NIH HHS, United States
    Id: P30 AG010129
  • Agency: NIMH NIH HHS, United States
    Id: R01 MH071940
  • Agency: NCRR NIH HHS, United States
    Id: U24 RR025736

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This is a list of tools and resources that we have found mentioned in this publication.


PLINK (tool)

RRID:SCR_001757

Open source whole genome association analysis toolset, designed to perform range of basic, large scale analyses in computationally efficient manner. Used for analysis of genotype/phenotype data. Through integration with gPLINK and Haploview, there is some support for subsequent visualization, annotation and storage of results. PLINK 1.9 is improved and second generation of the software.

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FreeSurfer (tool)

RRID:SCR_001847

Open source software suite for processing and analyzing human brain MRI images. Used for reconstruction of brain cortical surface from structural MRI data, and overlay of functional MRI data onto reconstructed surface. Contains automatic structural imaging stream for processing cross sectional and longitudinal data. Provides anatomical analysis tools, including: representation of cortical surface between white and gray matter, representation of the pial surface, segmentation of white matter from rest of brain, skull stripping, B1 bias field correction, nonlinear registration of cortical surface of individual with stereotaxic atlas, labeling of regions of cortical surface, statistical analysis of group morphometry differences, and labeling of subcortical brain structures.Operating System: Linux, macOS.

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ADNI - Alzheimer's Disease Neuroimaging Initiative (tool)

RRID:SCR_003007

Database of the results of the ADNI study. ADNI is an initiative to develop biomarker-based methods to detect and track the progression of Alzheimer's disease (AD) that provides access to qualified scientists to their database of imaging, clinical, genomic, and biomarker data.

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Foundation for the National Institutes of Health (tool)

RRID:SCR_004493

A public charity whose mission is to support the NIH in its mission to improve health, by forming and facilitating public-private partnerships for biomedical research and training. Its vision is Building Partnerships for Discovery and Innovation to Improve Health. The FNIH draws together the world''s foremost researchers and resources, pressing the frontier to advance critical discoveries. They are recognized as the number-one medical research charity in the countryleveraging support, and convening high level partnerships, for the greatest impact on the most urgent medical challenges we face today. Grants are awarded as part of a public-private partnership with the National Heart, Lung, and Blood Institute (NHLBI) on behalf of The Heart Truth in support of women''s heart health education and research. Funding for the Community Action Program is provided by the FNIH through donations from individuals and corporations including The Heart Truth partners Belk Department Stores, Diet Coke, and Swarovski. Successful biomedical research relies upon the knowledge, training and dedication of those who conduct it. Bringing multiple disciplines to bear on health challenges requires innovation and collaboration on the part of scientists. Foundation for NIH partnerships operate in a variety of ways and formats to recruit, train, empower and retain their next generation of researchers. From lectures and multi-week courses, to scholarships and awards through fellowships and residential training programs, their programs respond to the needs of scientists at every level and stage in their careers.

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