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DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy.

Developmental cell | 2012

Facioscapulohumeral dystrophy (FSHD) is one of the most common inherited muscular dystrophies. The causative gene remains controversial and the mechanism of pathophysiology unknown. Here we identify genes associated with germline and early stem cell development as targets of the DUX4 transcription factor, a leading candidate gene for FSHD. The genes regulated by DUX4 are reliably detected in FSHD muscle but not in controls, providing direct support for the model that misexpression of DUX4 is a causal factor for FSHD. Additionally, we show that DUX4 binds and activates LTR elements from a class of MaLR endogenous primate retrotransposons and suppresses the innate immune response to viral infection, at least in part through the activation of DEFB103, a human defensin that can inhibit muscle differentiation. These findings suggest specific mechanisms of FSHD pathology and identify candidate biomarkers for disease diagnosis and progression.

Pubmed ID: 22209328 RIS Download

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Associated grants

  • Agency: NICHD NIH HHS, United States
    Id: U5K12HD043376-08
  • Agency: NINDS NIH HHS, United States
    Id: P01NS069539
  • Agency: NINDS NIH HHS, United States
    Id: P01 NS069539
  • Agency: NIAMS NIH HHS, United States
    Id: R01 AR045203
  • Agency: NCRR NIH HHS, United States
    Id: UL1 RR024160
  • Agency: NIAMS NIH HHS, United States
    Id: R01AR045203
  • Agency: NINDS NIH HHS, United States
    Id: P01 NS069539-03
  • Agency: NCRR NIH HHS, United States
    Id: UL1 RR024160-02
  • Agency: NICHD NIH HHS, United States
    Id: K12 HD043376-08
  • Agency: NIAMS NIH HHS, United States
    Id: R01 AR045203-13
  • Agency: NICHD NIH HHS, United States
    Id: K12 HD043376

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Gene Set Enrichment Analysis (tool)

RRID:SCR_003199

Software package for interpreting gene expression data. Used for interpretation of a large-scale experiment by identifying pathways and processes.

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