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Analysis of the Otd-dependent transcriptome supports the evolutionary conservation of CRX/OTX/OTD functions in flies and vertebrates.

Developmental biology | 2008

Homeobox transcription factors of the vertebrate CRX/OTX family play critical roles in photoreceptor neurons, the rostral brain and circadian processes. In mouse, the three related proteins, CRX, OTX1, and OTX2, fulfill these functions. In Drosophila, the single founding member of this gene family, called orthodenticle (otd), is required during embryonic brain and photoreceptor neuron development. We have used global gene expression analysis in late pupal heads to better characterize the post-embryonic functions of Otd in Drosophila. We have identified 61 genes that are differentially expressed between wild type and a viable eye-specific otd mutant allele. Among them, about one-third represent potentially direct targets of Otd based on their association with evolutionarily conserved Otd-binding sequences. The spectrum of biological functions associated with these gene targets establishes Otd as a critical regulator of photoreceptor morphology and phototransduction, as well as suggests its involvement in circadian processes. Together with the well-documented role of otd in embryonic patterning, this evidence shows that vertebrate and fly genes contribute to analogous biological processes, notwithstanding the significant divergence of the underlying genetic pathways. Our findings underscore the common evolutionary history of photoperception-based functions in vertebrates and invertebrates and support the view that a complex nervous system was already present in the last common ancestor of all bilateria.

Pubmed ID: 18241855 RIS Download

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Associated grants

  • Agency: NICHD NIH HHS, United States
    Id: HD046387
  • Agency: NEI NIH HHS, United States
    Id: R01 EY013167-05
  • Agency: NEI NIH HHS, United States
    Id: R01 EY013167
  • Agency: NEI NIH HHS, United States
    Id: R01EY013167
  • Agency: NEI NIH HHS, United States
    Id: R01 EY013167-04
  • Agency: NEI NIH HHS, United States
    Id: P30 EY014104
  • Agency: NEI NIH HHS, United States
    Id: P30EY14104
  • Agency: NICHD NIH HHS, United States
    Id: T32 HD046387

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dChip Software (tool)

RRID:SCR_013504

Software for analysis and visualization of gene expression and SNP microarrays.

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