URL: https://github.com/bluenote-1577/sylph
Proper Citation: sylph (RRID:SCR_026478)
Description: Software tool for ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash. Species-level metagenome profiler that estimates genome-to-metagenome containment average nucleotide identity (ANI) through zero-inflated Poisson k-mer statistics, enabling ANI-based taxa detection. Offers precise, efficient profiling with accurate containment ANI estimation even for low-coverage genomes.
Resource Type: software resource, source code
Defining Citation: DOI:10.1038/s41587-024-02412-y
Keywords: metagenome profiler, taxonomic profiling, genome querying, metagenomic samples, average nucleotide identity, ANI-based taxa detection,
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