URL: https://squidpy.readthedocs.io/en/stable/
Proper Citation: Squidpy (RRID:SCR_026157)
Description: Software tool for analysis and visualization of spatial molecular data. Scalable framework for spatial omics analysis. Builds on top of scanpy and anndata, from which it inherits modularity and scalability. Provides analysis tools that leverages spatial coordinates of data, as well as tissue images.
Synonyms: Spatial Single Cell Analysis in Python
Resource Type: data analysis software, data processing software, data visualization software, software application, software resource, source code
Defining Citation: PMID:35102346
Keywords: spatial molecular data, data analysis, data visualization, spatial omics analysis,
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