URL: https://github.com/suhrig/arriba/
Proper Citation: Arriba (RRID:SCR_025854)
Description: Software tool for gene fusion detection from RNA-Seq data. Fusion detection algorithm specifically designed to meet demanding requirements of HTS-assisted precision oncology. Capable of detecting aberrant transcripts that are not called by most fusion detection methods but may be clinically relevant. This includes tumor suppressor genes that are occasionally inactivated by rearrangements within the gene or by translocations to introns or intergenic regions.
Resource Type: data analysis software, data processing software, software application, software resource, source code
Defining Citation: PMID:33441414
Keywords: gene fusion detection, RNA-Seq data, detecting aberrant transcripts,
Funding: Dietmar Hopp Foundation ; Government of Ontario ; Heidelberg Center for Personalized Oncology ; Ontario Institute for Cancer Research
Availability: Free, Available for download, Freely available
Resource Name: Arriba
Resource ID: SCR_025854
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
