URL: https://github.com/navinlabcode/copykat
Proper Citation: CopyKAT (RRID:SCR_024512)
Description: Software R package to estimate genomic copy number profiles at average genomic resolution of 5 Mb from read depth in high throughput single cell RNA sequencing data.Used for inference of genomic copy number and subclonal structure of human tumors from high-throughput single cell RNAseq data.
Synonyms: , Copynumber Karyotyping of Aneuploid Tumors
Resource Type: software toolkit, software resource
Defining Citation: PMID:33462507
Keywords: Inference of genomic copy number and subclonal structure of human tumors, high throughput single cell RNAseq data,
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