URL: https://bioconductor.org/packages/TFBSTools/
Proper Citation: tfbstools (RRID:SCR_024260)
Description: Software R package for analysis and manipulation of transcription factor binding sites. It includes matrices conversion between Position Frequency Matirx (PFM), Position Weight Matirx (PWM) and Information Content Matrix (ICM). It can also scan putative TFBS from sequence/alignment, query JASPAR database and provides a wrapper of de novo motif discovery software.
Synonyms: TFBSTools
Resource Type: software resource, software toolkit
Defining Citation: PMID:26794315
Keywords: analysis and manipulation of transcription factor binding sites, transcription factor binding sites analysis, transcription factor binding sites manipulation,
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