URL: https://metacpan.org/dist/FAST
Proper Citation: FAST Analysis of Sequences Toolbox (RRID:SCR_024074)
Description: Software Fast Analysis of Sequences Toolbox (FAST) is a set of UNIX utilities (for example fasgrep, fascut, fashead and fastr) that extends the UNIX toolbox paradigm to bioinformatic sequence records.FAST workflows are designed for serial processing of flatfile biological sequence record databases per-sequence, rather than per-line, through UNIX pipelines. The default data exchange format is multifasta (specifically, a restriction of BioPerl FastA format). FASTQ format is supported. FAST is designed for learnability, interoperability, interface consistency, rapid prototyping, fine-tuned control, and reproducibility. FAST tools expose the power of Perl and BioPerl to users in an easy-to-learn command-line paradigm.
Abbreviations: FAST
Synonyms: libfast-perl, Fast Analysis of Sequences Toolbox, FAST - FAST Analysis of Sequences Toolbox, fast
Resource Type: software toolkit, software resource
Keywords: Analysis of sequences, UNIX utilities, UNIX toolbox paradigm to bioinformatic sequence records, serial processing, flatfile biological sequence record databases per-sequence, FASTQ format, learnability, interoperability, interface consistency, rapid prototyping, fine-tuned control, reproducibility
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