URL: https://bitbucket.org/genomicepidemiology/kma/src/master/
Proper Citation: KMA (RRID:SCR_024054)
Description: Software mapping method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend.Used for aligning high quality reads against highly redundant databases, where unique matches often does not exist. Works for long low quality reads as well, such as those from Nanopore. Non-unique matches are resolved using the "ConClave" sorting scheme, and a consensus sequence are outputtet in addition to other common attributes, based on users demands.
Synonyms: kma
Resource Type: alignment software, image analysis software, software application, data processing software, software resource
Defining Citation: PMID:30157759
Keywords: aligning high quality reads against highly redundant databases, aligning high quality reads, highly redundant databases,
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