URL: https://CRAN.R-project.org/package=oncoPredict
Proper Citation: oncoPredict (RRID:SCR_023872)
Description: Software tool bridges in vitro drug screening with in vivo drug and biomarker discovery. Predicts in vivo or cancer patient drug response and biomarkers to enrich for response from cell line screening data. Builds model using ridge regression, and enables biomarker discovery by imputing drug response in large cancer molecular datasets. Enables drug specific biomarker identification by correcting for general level of drug sensitivity shared among the population.
Resource Type: data analysis software, software application, data processing software, software resource
Defining Citation: PMID:34260682
Keywords: drug specific biomarker identification, drug screening, drug and biomarker discovery, cancer molecular datasets, drug response,
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