URL: https://github.com/10XGenomics/subset-bam
Proper Citation: subset bam (RRID:SCR_023216)
Description: Software tool to subset 10x Genomics BAM file based on tag, most commonly cell barcode tag.Takes 10x Genomics BAM file, CSV file defining subset of cells you want to isolate, and produces new BAM file with only alignments associated with those cells.Subsets BAM files output from CellRanger by tag which is usually cell barcode.
Synonyms: subset-bam
Resource Type: software application, software resource
Keywords: CellRanger, subset 10x Genomics BAM file, CSV file defining subset of cells, cell barcode tag, isolate subset of cells, cell barcode
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