URL: https://github.com/gtonkinhill/panaroo
Proper Citation: Panaroo (RRID:SCR_021090)
Description: Software pipeline for pangenome investigation. Shares information between genomes to correct errors. Can call large structural variants.Fast and scalable to over 10k bacterial genomes.
Synonyms: Bacterial Pangenome Analysis Pipeline
Resource Type: data analysis software, data processing software, software application, software resource
Keywords: pangenome investigation, correct errors, genomes, large structural variants, bacterial genomes
Availability: Free, Available for download, Freely available
Resource Name: Panaroo
Resource ID: SCR_021090
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
