URL: https://github.com/mrc-ide/PhyDyn
Proper Citation: PhyDyn (RRID:SCR_018544)
Description: Sofware package for performing Bayesian phylogenetic inference under models that deal with structured populations with complex population dynamics. Enables simultaneous estimation of epidemiological parameters and pathogen phylogenies. Epidemiological modelling in BEAST.
Resource Type: software application, software resource, simulation software
Defining Citation: PMID:30422979
Keywords: Bayesian phylogenetic inference, epidemiological modelling, epidemiological parameter estimation, pathogen phylogeny estimation
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