URL: https://github.com/maplesond/portcullis
Proper Citation: Portcullis (RRID:SCR_016442)
Description: Software for filtering invalid Splice junctions from pre-aligned RNA-seq data. It takes as input a BAM file generated by an RNAseq mapper, then analyses and quantifies all splice junctions in the file before filtering (culling) those which are unlikely to be genuine.
Resource Type: data analysis software, data processing software, software application, software resource
Keywords: filter, invalid, splicing, rnaseq, sequence, sequencing, bam, junction, rna
Funding: Biotechnology and Biological Sciences Research Council (BBSRC)
Availability: Free, Available for download
Resource Name: Portcullis
Resource ID: SCR_016442
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
