URL: http://www.catma.org
Proper Citation: CATMA - Complete Arabidopsis Transcriptome MicroArray (RRID:SCR_007578)
Description: A database of Arabidopsis Gene-specific Sequence Tags (GSTs) designed and produced by the CATMA consortium. The aim of CATMA is the design and production of high quality GSTs covering most Arabidopsis genes. The GST repertoire is used by numerous groups for the production of DNA arrays for transcript profiling experiments.The database contains information about the GST probes, the PCR primers used for their amplification and the genes to which they hybridize, together with other information such as details of the groups involved and quality control results. CATMA microarrays constitute the foundation of the CAGE project aiming at the construction of a gene expression reference database for Arabidopsis. The CATMA GSTs are also the basic materials in the AGRIKOLA project focusing on the large-scale systematic RNAi silencing of Arabidopsis genes. CATMA is a consortium of research groups from eight European countries. All CATMA members are public laboratories, some with ties to private research institutions.
Abbreviations: CATMA
Synonyms: Complete Arabidopsis Transcriptome MicroArray
Resource Type: database, data or information resource
Keywords: gene-specific sequence tag, arabidopsis, dna array, transcript profiling, software
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