ARAMEMNON, a Novel Database for Arabidopsis Integral Membrane Proteins (RRID:SCR_007552)Copy Citation Copied
URL: http://aramemnon.botanik.uni-koeln.de
Proper Citation: ARAMEMNON, a Novel Database for Arabidopsis Integral Membrane Proteins (RRID:SCR_007552)
Description: A database of putative membrane proteins of Thale Cress (Arabidopsis thaliana), Rice (Oryza sativa) and about some 6700 putative membrane proteins of ~300 other seed plants. The database stores data about: * protein, cDNA and genomic sequences * exon predictions (A.thaliana and O.sativa) * different cDNA/protein models of genes (A.thaliana and O.sativa) * ontology terms according to the Gene Ontology (GO) Consortium * protein sequence motifs as predictable by using the PFAM database * transporter classification as predictable by using the TC-system * bibliographic references * predictions for transmembrane spanning proteins (transmembrane alpha helices, beta barrels) * predictions for membrane-anchored proteins (GPI-attachment, prenylation, myristoylation) * prediction of the subcellular location * consensus predictions (transmembrane alpha helices, subcellular location) * isospecic homologs (''paralogs'') * heterospecic homologs (''orthologs'')
Synonyms: ARAMEMNON
Resource Type: database, data or information resource
Keywords: arabidopsis, cdna, heterospecic homologs, isospecic homologs, membrane-anchored proteins, membrane protein, oryza, transmemebrane spanning proteins, FASEB list
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