URL: http://goblet.molgen.mpg.de/cgi-bin/goblet2008/goblet.cgi
Proper Citation: GOblet (RRID:SCR_006998)
Description: Tool that performs annotation based on GO and pathway terms for anonymous cDNA or protein sequences. It uses the species independent GO structure and vocabulary together with a series of protein databases collected from various sites, to perform a detailed GO annotation by sequence similarity searches. The sensitivity and the reference protein sets can be selected by the user. GOblet runs automatically and is available as a public service on our web server. GOblet expects query sequences to be in FASTA-Format (with header-lines). Protein and nucleotide sequences are accepted. Total size of all sequences submitted per request should not be larger than 50kb currently. For security reasons: Larger post's will be rejected. Due to limited capacities the queries may be processed in batches depending on the server load. The output of the BLAST job is filtered automatically and the relevant hits are displayed. In addition, the respective GO-terms are shown together with the complete GO-hierarchy of parent terms.
Abbreviations: GOblet
Resource Type: software resource, software application, analysis service resource, service resource, production service resource, data analysis service
Defining Citation: PMID:20134064, PMID:15215401, PMID:12824400
Keywords: gene, sequence, cdna, ontology or annotation browser, pathway, term enrichment, clustering, virus, genomic, protein, nucleotide
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Max Planck Institute for Molecular Genetics; Berlin; Germany |
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