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IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures (RRID:SCR_005815)
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URL: http://web.cbio.uct.ac.za/ITGOM/

Proper Citation: IT-GOM: Integrated Tool for IC-based GO Semantic Similarity Measures (RRID:SCR_005815)

Description: The Integrated Tool for IC-based GO Semantic Similarity Measures (IT-GOM) integrates the currently known GO semantic similarity measures into a single tool. It provides the information content (IC) of GO terms, semantic similarity between GO terms and GO-based protein functional similarity scores. The specificity of GO terms and the similarity of biological content between GO terms or proteins are transformed into numeric values for protein analyses at the functional level. The integration of the different measures enables users to choose the measure best suited to their application and to compare results between different semantic similarity measures. Platform: Online tool

Abbreviations: IT-GOM

Synonyms: Integrated Tool for IC-based GO Semantic Similarity Measures (IT-GOM), Integrated Tool for IC-based GO Semantic Similarity Measures

Resource Type: production service resource, service resource, analysis service resource, data analysis service

Keywords: semantic similarity, gene ontology, protein, functional similarity, function, annotation, topology

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This resource

is listed by

Gene Ontology Tools

is related to

Gene Ontology

is related to

UniProt

is related to

GOA

has parent organization

University of Cape Town; Western Cape; South Africa

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