URL: http://www.cs.helsinki.fi/en/gsa/traph/
Proper Citation: Traph (RRID:SCR_005119)
Description: A software tool for transcript identification and quantification with RNA-Seq. The method has a two-fold advantage: on the one hand, it translates the problem as an established one in the field of network flows, which can be solved in polynomial time, with different existing solvers; on the other hand, it is general enough to encompass many of the previous proposals under the least sum of squares model.
Abbreviations: Traph
Synonyms: Transcripts in gRAPHs - Traph: A tool for transcript identification and quantification with RNA-Seq, Transcripts in gRAPHs
Resource Type: software resource
Defining Citation: PMID:23734627
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