URL: http://genome.ucsc.edu/cgi-bin/hgVisiGene
Proper Citation: VisiGene Image Browser (RRID:SCR_003341)
Description: Virtual microscope for viewing in situ images that show where a gene is used in an organism, sometimes down to cellular resolution. The user can examine cell-by-cell as well as tissue-by-tissue expression patterns. Users can retrieve images that meet specific search criteria, then interactively zoom and scroll across the collection. Image set contributions are welcome. The following image collections are currently available for browsing: * High-quality high-resolution images of eight-week-old male mouse sagittal brain slices with reverse-complemented mRNA hybridization probes from the Allen Brain Atlas, courtesy of the Allen Institute for Brain Science * Mouse in situ images from the Jackson Lab Gene Expression Database (GXD) at MGI * Transcription factors in mouse embryos from the Mahoney Center for Neuro-Oncology * Mouse head and brain in situ images from NCBI''''s Gene Expression Nervous System Atlas (GENSAT) database * Xenopus laevis in situ images from the National Institute for Basic Biology (NIBB) XDB project
Abbreviations: VisiGene
Resource Type: data or information resource, data analysis service, storage service resource, image collection, analysis service resource, service resource, production service resource, database, image repository, data repository
Defining Citation: PMID:18996895, PMID:17142222
Keywords: molecular neuroanatomy resource, midbrain, brain, in situ, gene, theiler stage, visualization, cellular resolution, mrna hybridization, in situ hybridization, male, nieuwkoop, faber stage, gene expression, embryonic mouse, adult mouse
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Source: SciCrunch Registry
