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SNAP - SNP Annotation and Proxy Search (RRID:SCR_002127)
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Resource Information

URL: http://www.broadinstitute.org/mpg/snap/

Proper Citation: SNAP - SNP Annotation and Proxy Search (RRID:SCR_002127)

Description: A computer program and web-based service for the rapid retrieval of linkage disequilibrium proxy single nucleotide polymorphism (SNP) results given input of one or more query SNPs and based on empirical observations from the International HapMap Project and the 1000 Genomes Project. A series of filters allow users to optionally retrieve results that are limited to specific combinations of genotyping platforms, above specified pairwise r2 thresholds, or up to a maximum distance between query and proxy SNPs. SNAP can also generate linkage disequilibrium plots

Abbreviations: SNAP

Synonyms: SNAP (SNP Annotation and Proxy Search), SNAP 2, SNP Annotation and Proxy Search

Resource Type: software resource, software application, analysis service resource, service resource, production service resource, data analysis service

Defining Citation: PMID:18974171

Keywords: gene, genetic, genomic, r, oracle, single nucleotide polymorphism, linkage disequilibrium, genotypeing array, physical distance, membership, proxy, plot

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