URL: http://srv00.ibbe.cnr.it/SpliceAidF/
Proper Citation: SpliceAid-F (RRID:SCR_002082)
Description: A database of human splicing factors and their RNA - binding sites. For each splicing factor (SF) the database reports its functional domains and its protein and chemical interactors. Furthermore, experimentally validated RNA-SF interactions are collected, including relevant information on the RNA binding sites such as the genes where these sites lie, their genomic coordinates, the splicing effects, experimental procedures, as well as the corresponding bibliographic references. Information from experiments showing no RNA-SF binding is also collected, at least in the assayed conditions. SpliceAid-F contains 4227 interactions, 2622 RNA binding sites and 1170 no-binding sites, including information on binding and no-binding specificity in different cellular contexts. SpliceAid-F can provide significant information to explain an observed splicing pattern as well as the effect of mutations in functional regulatory elements.
Abbreviations: SpliceAid-F
Synonyms: SpliceAid-F: a database of human splicing factors and their binding sites
Resource Type: database, data or information resource
Defining Citation: PMID:23118479
Keywords: splicing, protein, rna, splicing factor, interaction, binding site, no-binding site, splicing pattern, mutation, regulatory element, splicing factor
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