URL: http://burgundy.cmmt.ubc.ca/cgi-bin/RAVEN/a?rm=home
Proper Citation: RAVEN (RRID:SCR_001937)
Description: Tool to search for putative regulatory genetic variation in your favorite gene. Single nucleotide polymorphisms (SNPs) (from dbSNP and user defined) are analyzed for overlap with potential transcription factor binding sites (TFBS) and phylogenetic footprinting using UCSC phastCons scores from multiple alignments of 8 vertebrate genomes.
Abbreviations: RAVEN
Synonyms: Regulatory analysis of Variation in Enhancers, RAVEN - Regulatory analysis of Variation in ENhancers
Resource Type: data or information resource, analysis service resource, service resource, production service resource, database, data analysis service
Defining Citation: PMID:18208319
Keywords: transcription factor binding site, phylogenetic footprint, regulatory sequence variation, genetic variation, in silico, regulatory sequence, FASEB list
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