URL: http://sun.aei.polsl.pl/kmc/
Proper Citation: KMC (RRID:SCR_001245)
Description: Software utility for counting k-mers (sequences of consecutive k symbols) in a set of reads from genome sequencing projects. It scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented makes use mostly of disk space rather than RAM, which allows to use KMC even on rather typical personal computers.
Abbreviations: KMC
Synonyms: KMC - K-mer Counter, K-mer Counter
Resource Type: software resource
Defining Citation: PMID:23679007, DOI:10.1093/bioinformatics/btv022
Keywords: c++, k-mer, genome sequencing, linux, windows, de bruijn graph
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