URL: http://www.broadinstitute.org/science/programs/genome-biology/computational-rd/somaticcall-manual
Proper Citation: SomaticCall (RRID:SCR_001196)
Description: Software program that finds single-base differences (substitutions) between sequence data from tumor and matched normal samples. It is designed to be highly stringent, so as to achieve a low false positive rate. It takes as input a BAM file for each sample, and produces as output a list of differences (somatic mutations). Note: This software package is no longer supported and information on this page is provided for archival purposes only.
Abbreviations: SomaticCall
Resource Type: software resource
Keywords: somatic mutation, substitution, sequence, bam, mutation
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