URL: http://rulai.cshl.edu/rmap/
Proper Citation: RMAP (RRID:SCR_000695)
Description: Software for short-read mapping to accurately map reads from the next-generation sequencing technology. It can map reads with or without error probability information (quality scores) and supports paired-end reads or bisulfite-treated reads mapping. There is no limitaions on read widths or number of mismatches. RMAP can now map more than 8 million reads in an hour at full sensitivity to 2 mismatches.
Abbreviations: RMAP
Resource Type: software resource
Defining Citation: PMID:19736251
Keywords: next-generation sequencing, solexa
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