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Resource Name
RRID:SCR_006694 RRID Copied      
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BACTIBASE (RRID:SCR_006694)
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The RRID (nlx_54530) is not the primary RRID. It is an alternate RRID or alternate ID.

Resource Information

URL: http://bactibase.pfba-lab-tun.org/main.php

Proper Citation: BACTIBASE (RRID:SCR_006694)

Description: Data repository of bacteriocin natural antimicrobial peptides and includes data collected from published literature as well as high-throughput datasets. The database provides a manually curated annotation of bacteriocin sequences. New bacteriocin submissions are welcome. Various tools have been incorporated for bacteriocin analysis, such as homology search, multiple sequence alignments, Hidden Markov Models, molecular modelling and retrieval through our taxonomy Browser. BACTIBASE should be a useful tool in food preservation or food safety applications and could have implications for the development of new drugs for medical use. BACTIBASE contains calculated or predicted physicochemical properties of 218 bacteriocins produced by both Gram-positive (194) and Gram-negative bacteria (19). They also note the presence of three bacteriocins from the Archaea domain. The database now comprises 31 genera (2009).

Abbreviations: BACTIBASE

Synonyms: BACTIBASE - database dedicated to bacteriocins

Resource Type: data or information resource, storage service resource, database, service resource, data repository

Defining Citation: PMID:20105292, PMID:17941971

Keywords: genetics, bacteriocin, chemistry, peptide sequence, data analysis service

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