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NCBI Genome Survey Sequences Database (RRID:SCR_002146)
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The RRID (nif-0000-20938) is not the primary RRID. It is an alternate RRID or alternate ID.

Resource Information

URL: https://www.ncbi.nlm.nih.gov/genbank/dbgss/

Proper Citation: NCBI Genome Survey Sequences Database (RRID:SCR_002146)

Description: Database of unannotated short single-read primarily genomic sequences from GenBank including random survey sequences clone-end sequences and exon-trapped sequences. The GSS division of GenBank is similar to the EST division, with the exception that most of the sequences are genomic in origin, rather than cDNA (mRNA). It should be noted that two classes (exon trapped products and gene trapped products) may be derived via a cDNA intermediate. Care should be taken when analyzing sequences from either of these classes, as a splicing event could have occurred and the sequence represented in the record may be interrupted when compared to genomic sequence. The GSS division contains (but is not limited to) the following types of data: * random single pass read genome survey sequences. * cosmid/BAC/YAC end sequences * exon trapped genomic sequences * Alu PCR sequences * transposon-tagged sequences Although dbGSS sequences are incorporated into the GSS Division of GenBank, annotation in dbGSS is more comprehensive and includes detailed information about the contributors, experimental conditions, and genetic map locations.

Abbreviations: GSS

Synonyms: Entrez GSS, NCBI dbGSS, dbGSS

Resource Type: data or information resource, database

Keywords: gene sequencing, database, exon trapped, gene trapped, genomic sequences in origin, gold standard

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NCBI

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GenBank

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