URL: https://github.com/pinellolab/pychromVAR
Proper Citation: pychromVAR (RRID:SCR_027456)
Description: Software Python package for inferring transcription factor binding variability from scATAC-seq data by implmenting algorithm proposed in chromVAR. It is built on anndata and mudata therefore can work seamlessly with scanpy and muon pipeline.
Resource Type: software resource, software toolkit
Keywords: inferring transcription factor binding variability, scATAC-seq data,
Availability: Free, Available for download, Freely available
Resource Name: pychromVAR
Resource ID: SCR_027456
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
