URL: https://github.com/hartwigmedical/hmftools/tree/master/linx
Proper Citation: LINX (RRID:SCR_027133)
Description: Software annotation, interpretation and visualisation tool for structural variants. Used to aid interpretation of structural variant and copy number data derived from short-read, whole-genome sequencing. Classifies raw structural variant calls into distinct events and predicts their effect on local structure of derivative chromosome and functional impact on affected genes.
Resource Type: software application, software resource
Defining Citation: PMID:36776527
Keywords: Classify raw structural variant calls, interpretation of structural variant and copy number data, short-read, functional impact on affected genes, whole-genome sequencing, annotation, interpretation, visualisation, structural variants,
Funding: Hartwig Medical Foundation
Availability: Free, Available for download, Freely available
Resource Name: LINX
Resource ID: SCR_027133
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
