URL: https://pyscenic.readthedocs.io/en/latest/
Proper Citation: pySCENIC (RRID:SCR_025802)
Description: Software tool as Python implementation of the SCENIC pipeline which enables to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
Synonyms: Python Single-Cell rEgulatory Network Inference and Clustering
Resource Type: data analysis software, data processing software, software application, software resource, software toolkit, source code
Keywords: Network Inference and Clustering, infer, transcription factors, gene regulatory networks, cell types, single-cell RNA-seq data,
Availability: Free, Available for download, Freely available
Resource Name: pySCENIC
Resource ID: SCR_025802
Expand AllWe found {{ ctrl2.mentions.all_count }} mentions in open access literature.
We have not found any literature mentions for this resource.
We are searching literature mentions for this resource.
Most recent articles:
{{ mention._source.dc.creators[0].familyName }} {{ mention._source.dc.creators[0].initials }}, et al. ({{ mention._source.dc.publicationYear }}) {{ mention._source.dc.title }} {{ mention._source.dc.publishers[0].name }}, {{ mention._source.dc.publishers[0].volume }}({{ mention._source.dc.publishers[0].issue }}), {{ mention._source.dc.publishers[0].pagination }}. (PMID:{{ mention._id.replace('PMID:', '') }})
Check
for resource mentions.
A list of researchers who have used the resource and an author search tool
Find mentions based on location
{{ ctrl2.mentions.errors.location }}
A list of researchers who have used the resource and an author search tool. This is available for resources that have literature mentions.
No rating or validation information has been found for pySCENIC.
No alerts have been found for pySCENIC.
Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
