URL: https://github.com/ENCODE-DCC/long-read-rna-pipeline
Proper Citation: ENCODE-DCC long read RNA-seq pipeline (RRID:SCR_025093)
Description: Software pipeline to handle data from PacBio and Oxford Nanopore platforms. Pipeline does read alignment, corrects for mismatches, microindels and non-canonical splice junctions and then provides quantitations and QC-metrics.
Synonyms: ENCODE-DCC/long-read-rna-pipeline
Resource Type: data processing software, software application, software resource, source code
Keywords: PacBio platform data, Oxford Nanopore platform data, read alignment, correct, mismatches, microindels, non-canonical splice junctions, provide quantitations and QC-metrics,
Availability: Free, Available for download, Freely available
Resource Name: ENCODE-DCC long read RNA-seq pipeline
Resource ID: SCR_025093
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Source: SciCrunch Registry (RRID:SCR_005400)
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URL: https://rrid.site/rin/sources/SCR_005400
