URL: https://robokop.renci.org/
Proper Citation: ROBOKOP (RRID:SCR_023437)
Description: ROBOKOP system consists of web based user interface, API server, and several worker servers. Biomedical knowledge graph that integrates and semantically harmonizes important knowledge sources. Contains nodes representing entities such as genes, chemicals, and diseases, and edges representing relationships between them. Abstraction layer and user interface for knowledge graphs to support question answering. Used for reasoning over structured biomedical knowledge databases as part of NCATS translator and reasoner programs. ROBOKOP Knowledge Graph Builder constructs KG and provides extensible framework to handle graph query over and integration of federated data sources.
Abbreviations: ROBOKOP
Synonyms: , ROBOKOP Graph Knowledgebase; Reasoning Over Biomedical Objects linked in Knowledge Oriented Pathways, ROBOKOP Knowledge Graph Builder (KGB), ROBOKOP KG, ROBOKOP KGB, ROBOKOP Knowledge Graph
Resource Type: data or information resource, portal, project portal
Defining Citation: PMID:31410449, PMID:31769676
Keywords: NCATS translator, knowledge graphs, structured biomedical knowledge databases, genes, chemicals, diseases, node, relationships edges,
Funding: NCATS OT2R002514; NCATS OT3TR002020; NIEHS U24ES035214
Availability: Free, Freely available
Resource Name: ROBOKOP
Resource ID: SCR_023437
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
