URL: https://github.com/vitkl/ParetoTI
Proper Citation: ParetoTI (RRID:SCR_022991)
Description: Software R toolbox for Archetypal Analysis and Pareto Task Inference for unsupervised characterisation of single cell data. Allows describing continuum of cell states by identifying representative cells with most distinctive expression. Detecting which genes and functional annotations make those cells distinctive gives marker genes and predicted functions for each state.
Resource Type: software resource, software toolkit
Defining Citation: PMID:25622107
Keywords: Archetypal Analysis, Pareto Task Inference, unsupervised characterisation, single cell data,
Funding: European Research Council ; Human Frontier Science Program ; Rising Tide Cancer Research Fund ; Swiss National Science Foundation
Availability: Free, Available for download, Freely available
Resource Name: ParetoTI
Resource ID: SCR_022991
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Source: SciCrunch Registry (RRID:SCR_005400)
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