URL: https://github.com/sciensic/SCIGA
Proper Citation: SCIGA (RRID:SCR_021002)
Description: Software Perl toolkit for 10X single cell immunoglobulin repertoires analysis. Uses raw reads or output of Cellranger as input and performs reads quality control, immunoglobulin sequence assembly, sequence annotation, heavy- and light- chain pairing, computing statistics and visualizing.
Synonyms: SCIGA_v1.0.0.tar.gz
Resource Type: data analysis software, data processing software, software application, software resource, software toolkit
Keywords: 10X single cell immunoglobulin repertoires analysis, quality control, immunoglobulin sequence assembly, sequence annotation, heavy and light chain pairing, computing statistics, visualizing.
Availability: Free, Available for download, Freely available
Resource Name: SCIGA
Resource ID: SCR_021002
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
