URL: http://gmdd.shgmo.org/Computational-Biology/ChIP-Seq/download/SIPeS
Proper Citation: SIPeS (RRID:SCR_010865)
Description: An algorithm that allows researchers to identify transcript factor binding sites from paired-end sequencing reads. SIPeS uses a dynamic baseline directly through the piling up of fragments to effectively find peaks, overcoming the disadvantage of estimating the average length of DNA fragments from singled-end sequencing achieving more powerful prediction binding sites with high sensitivity and specificity.
Abbreviations: SIPeS
Synonyms: SIPeS - Site Identification from Paired-end Sequencing, Site Identification from Paired-end Sequencing
Resource Type: software resource
Defining Citation: PMID:20144209
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