URL: https://github.com/BRAINSia/BRAINSTools/tree/master/BRAINSMush
Proper Citation: BRAINSMush (RRID:SCR_009485)
Description: Tool to generate brain volume mask from input of T1 and T2-weighted images alongside a region of interest brain mask. This volume mask omits dura, skull, eyes, etc. The program is built upon ITK and uses the Slicer3 execution model framework to define the command line arguments and can be fully integrated with Slicer3 using the module discovery capabilities of Slicer3.
Abbreviations: BRAINSMush
Resource Type: image analysis software, segmentation software, software application, data processing software, software resource
Keywords: analyze, application, bsd license, bsd/mit-style open source license, c++, console (text based), dicom, magnetic resonance, nifti, nrrd, segmentation
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